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Protein Overview: CPS1

General Information:
Name(s) found: CPS1 / YJL172W [SGD]
Description(s) found:
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  • gi|6322289|ref|NP_012363.1| Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions; Cps1p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|3596|emb|CAA44790.1| carboxypeptidase yscS [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1168802|sp|P27614.2|CBPS_YEAST RecName: Full=Carboxypeptidase S; AltName: Full=YSCS; AltName: Full=GLY-X carboxypeptidase [NCBI NR]
  • pir||S16693 Gly-X carboxypeptidase (EC 3.4.17.4) precursor - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1008367|emb|CAA89467.1| CPS1 [Saccharomyces cerevisiae] [NCBI NR]
  • Carboxypeptidase S OS=Saccharomyces cerevisiae GN=CPS1 PE=1 SV=2 [Swiss-Prot]
  • CPS1 Gly-X carboxypeptidase YSCS precursor [mips]
  • Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions [SGD]
  • CPS1, Chr X from 97730-99460 [yeast_orfs2]
  • Chr X from 97730-99460 [yeastorf3.fasta]
  • (P27614) Carboxypeptidase S precursor (EC 3.4.17.4) (YSCS) (GLY-X carboxypeptidase) [4932.FASTACCERV.txt]
  • CPS1 SGDID:S0003708, Chr X from 97731-99461, Verified ORF [yeastflysequest.fasta]
  • Cps1p [Saccharomyces cerevisiae]gi|3596|emb|CAA44790.1| carboxypeptidase yscS [Saccharomyces cerevisiae]gi|1008367|emb|CAA89467.1| CPS1 [Saccharomyces cerevisiae]gi|101231|pir||S16693 Gly-X carboxypeptidase (EC 3.4.17.4) precursor - yeast (Saccharomyc [nrdb_11152004_Chlamydomonas]
  • CPS1 SGDID:S000003708, Chr X from 97731-99461, Verified ORF, "Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions; Cps1p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • CPS1 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • carboxypeptidase yscS [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Carboxypeptidase S (YSCS) (GLY-X carboxypeptidase) [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Carboxypeptidase S OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CPS1 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • CPS1 SGDID:S000003708, Chr X from 97737-99467, Genome Release 64-1-1, Verified ORF, "Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions" [yeast-030211-contam.fasta]
  • CPS1 SGDID:S000003708, Chr X from 97737-99467, Genome Release 64-2-1, Verified ORF, "Vacuolar carboxypeptidase S; expression is induced under low-nitrogen conditions" [20141208_orf_trans.fasta]
  • YJL172W SGDID:S000003708, Chr X from 97737-99467, Genome Release 64-1-1, Verified ORF, "Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 576 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole [TASLink to PubMed article]
    Biological Process: nitrogen compound metabolic process [IMPLink to PubMed article]
    proteolysis [IMPLink to PubMed article][TASLink to PubMed article]
    Molecular Function: Gly-X carboxypeptidase activity [IMPLink to PubMed article][TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIALPVEKAP RKSLWQRHRA FISGIVALII IGTFFLTSGL HPAPPHEAKR PHHGKGPMHS  60
   61 PKCEKIEPLS PSFKHSVDTI LHDPAFRNSS IEKLSNAVRI PTVVQDKNPN PADDPDFYKH 120
  121 FYELHDYFEK TFPNIHKHLK LEKVNELGLL YTWEGSDPDL KPLLLMAHQD VVPVNNETLS 180
  181 SWKFPPFSGH YDPETDFVWG RGSNDCKNLL IAEFEAIEQL LIDGFKPNRT IVMSLGFDEE 240
  241 ASGTLGAASL ASFLHERYGD DGIYSIIDEG EGIMEVDKDV FVATPINAEK GYVDFEVSIL 300
  301 GHGGHSSVPP DHTTIGIASE LITEFEANPF DYEFEFDNPI YGLLTCAAEH SKSLSKDVKK 360
  361 TILGAPFCPR RKDKLVEYIS NQSHLRSLIR TTQAVDIING GVKANALPET TRFLINHRIN 420
  421 LHSSVAEVFE RNIEYAKKIA EKYGYGLSKN GDDYIIPETE LGHIDITLLR ELEPAPLSPS 480
  481 SGPVWDILAG TIQDVFENGV LQNNEEFYVT TGLFSGNTDT KYYWNLSKNI YRFVGSIIDI 540
  541 DLLKTLHSVN EHVDVPGHLS AIAFVYEYIV NVNEYA

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) CPS1 PRC1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run VAM3 sample: hx3 Hao Xu, et al. (2010)
    View Run VAM3 sample: hx4 Hao Xu, et al. (2010)
    View Run VAM3 Sample: HX11 - both fusion and trans-SNARE complex formation take place. Hao Xu, et al. (2010)
    View Run VAM3 Sample: HX12 - trans-SNARE complex formation and fusion are inhibited (control). Hao Xu, et al. (2010)
    View Run VAM3 Sample: HX13 - trans-SNARE complex forms but fusion is blocked. Hao Xu, et al. (2010)
    View Run VAM3 Sample: HX14 - mixture in detergent (control). Hao Xu, et al. (2010)
    View Run VAM3 hx21: both fusion and trans-SNARE complex formation take place. Investigating Vam3p, Nyv1p and their partners in trans-SNARE complex Hao Xu, et al. (2010)
    View Run VAM3 hx23: mixture in detergent (control) Investigating Vam3p, Nyv1p and their partners in trans-SNARE complex Hao Xu, et al. (2010)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] deduced N/A No confident structure predictions are available.
    2 View Details [69..291]
    [401..479]    		 PSI-BLAST 32.0 Carboxypeptidase G2, catalytic domain; Carboxypeptidase G2
    3 View Details [292..400] PSI-BLAST 32.0 Carboxypeptidase G2, catalytic domain; Carboxypeptidase G2
    4 View Details [480..576] ORFEUS 7.46 Aminopeptidase PepV

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  4.61719816036179 bayes_pls_golite062009
  • peptidase activity
    		•  4.41512153958838 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.59809762149163 bayes_pls_golite062009
  • catalytic activity
    		•  2.00064748759729 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.906571162336786 bayes_pls_golite062009
  • binding
    		•  0.767655217795721 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.529831416345723 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  0.389857234977383 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle