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Protein Overview: YHI9

General Information:
Name(s) found: YHI9 / YHR029C [SGD]
Description(s) found:
Found 30 descriptions.
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  • Protein of unknown function; null mutant is defective in unfolded protein response; possibly involved in a membrane regulation metabolic pathway; member of the PhzF superfamily, though most likely not involved in phenazine production [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLMVPFKQV DVFTEKPFMG NPVAVINFLE IDENEVSQEE LQAIANWTNL SETTFLFKPS  60
   61 DKKYDYKLRI FTPRSELPFA GHPTIGSCKA FLEFTKNTTA TSLVQECKIG AVPITINEGL 120
  121 ISFKAPMADY ESISSEMIAD YEKAIGLKFI KPPALLHTGP EWIVALVEDA ETCFNANPNF 180
  181 AMLAHQTKQN DHVGIILAGP KKEAAIKNSY EMRAFAPVIN VYEDPVCGSG SVALARYLQE 240
  241 VYKFEKTTDI TISEGGRLKR NGLMLASIKK EADNSTSYYI AGHATTVIDG KIKV

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) ISA2 NHP6A PUF4 RPL17A RPL17B RPL18A, RPL18B RPL24A RPL29 RPL2A, RPL2B RPL3 RPL30 RPL32 RPL36A RPL42B, RPL42A RPL43B, RPL43A RPL4A RPL6A RPL8B RPS16B, RPS16A RPS17B RPS1A RPS30B, RPS30A RPS9B YHI9
    View Details Krogan NJ, et al. (2006) BRE2 ERF2 SDC1 SET1 SHG1 SPP1 SWD1 SWD3 YHI9 YLL023C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen UMP1 YHI9 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..123]
    [281..294]    		 PSI-BLAST 57.39794 Diaminopimelate epimerase
    2 View Details [124..280] PSI-BLAST 57.39794 Diaminopimelate epimerase


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle