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Protein Overview: YGR237C

General Information:
Name(s) found: YGR237C [SGD]
Description(s) found:
Found 25 descriptions.
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  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 785 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAKTFTKH ISFDDLAPSL IDDQATIIKN DSHHVGLNNH FLHIPPQFNP VYKNTLTGSH  60
   61 GSNDLATDES LDSPEDEEAS SPLQLGTPTS TTSGVPHFYT QVFSPAAHDP SKSYLRSPSV 120
  121 ERSRSESPMF RSRRRTSVRL PPPPKVSVLK KSRKAADEQG PIDDIDIGDL DFELERKMTK 180
  181 MTERNTQKNS GSRKGYTQAA FANLNEVEDR IETKSMVDLS ESENMESSKK RSKSFAGMTD 240
  241 EELAKLEEFY ISKGRSNKTK IDQFDFGEQV PVYLNTTESK TDSSNVTDPL AAIYPSRPTI 300
  301 VHNAISMTID HPDYENYISN TKEKLNCKDK DDDVDLRVVS CYISGRRYTW SSVDWYVENL 360
  361 TRNGDHLVII TTIPEFEAKI DTLAYKEKRR HRLERMTSNT SESMTTASHS LIGPDLSSPL 420
  421 STGIRIEAIH NEAKQTCSDI LNYYARRLAT KIVRISIEMV KENSTRSAII SATSLYRPSL 480
  481 QVISTVSANI QIKFRNGKVK LPFFLMKHFA MPAFVVPFEF IKPELLIKPR VDKDEQDNSD 540
  541 DLKTEVRKKE RLQWLSALIR RTLENPFTKH KVVDSDDEES DSDESVTSVN EYFPISPEKK 600
  601 EEMEFFDKMG YVRPKPSRQV LLDDNTLMKY DSSGRKLTPI ESRNSRRSSK RSSRIQFNNN 660
  661 GIYKVKSMVD DIYNHETAST PHIKTALKWD NEDPKMKFTS HPMRKTKSAG LSPRTSSTSS 720
  721 SSGQRKAHHH HHHHNHVSRT KTTESTKSGN SKKDSSSSST NDHQFKRSEK KKKSKFGSIF 780
  781 KKVFG

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) IMP2' YGR237C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #13 Mitotic Prep2-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YGR237C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] deduced N/A No confident structure predictions are available.
    2 View Details [332..579] MSA 1.003958 View MSA. No confident structure predictions are available.
    3 View Details [580..785] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle