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View Structure Prediction Details

Protein: YGR237C
Organism: Saccharomyces cerevisiae
Length: 785 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR237C.

Description E-value Query
Range
Subject
Range
YG51_YEAST - Uncharacterized protein YGR237C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR237C ...
YGR237C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..785] [1..785]

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Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAKTFTKH ISFDDLAPSL IDDQATIIKN DSHHVGLNNH FLHIPPQFNP VYKNTLTGSH  60
   61 GSNDLATDES LDSPEDEEAS SPLQLGTPTS TTSGVPHFYT QVFSPAAHDP SKSYLRSPSV 120
  121 ERSRSESPMF RSRRRTSVRL PPPPKVSVLK KSRKAADEQG PIDDIDIGDL DFELERKMTK 180
  181 MTERNTQKNS GSRKGYTQAA FANLNEVEDR IETKSMVDLS ESENMESSKK RSKSFAGMTD 240
  241 EELAKLEEFY ISKGRSNKTK IDQFDFGEQV PVYLNTTESK TDSSNVTDPL AAIYPSRPTI 300
  301 VHNAISMTID HPDYENYISN TKEKLNCKDK D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [332-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDVDLRVVSC YISGRRYTWS SVDWYVENLT RNGDHLVIIT TIPEFEAKID TLAYKEKRRH  60
   61 RLERMTSNTS ESMTTASHSL IGPDLSSPLS TGIRIEAIHN EAKQTCSDIL NYYARRLATK 120
  121 IVRISIEMVK ENSTRSAIIS ATSLYRPSLQ VISTVSANIQ IKFRNGKVKL PFFLMKHFAM 180
  181 PAFVVPFEFI KPELLIKPRV DKDEQDNSDD LKTEVRKKER LQWLSALIRR TLENPFTKHK 240
  241 VVDSDDEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [580-785]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDSDESVTSV NEYFPISPEK KEEMEFFDKM GYVRPKPSRQ VLLDDNTLMK YDSSGRKLTP  60
   61 IESRNSRRSS KRSSRIQFNN NGIYKVKSMV DDIYNHETAS TPHIKTALKW DNEDPKMKFT 120
  121 SHPMRKTKSA GLSPRTSSTS SSSGQRKAHH HHHHHNHVSR TKTTESTKSG NSKKDSSSSS 180
  181 TNDHQFKRSE KKKKSKFGSI FKKVFG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle