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Protein Overview: YGL242C

General Information:
Name(s) found: YGL242C [SGD]
Description(s) found:
Found 32 descriptions.
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  • Putative protein of unknown function; deletion mutant is viable [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 181 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTEGASLSE QLLDAARRNN LDLLETVFDS LDNDPEKIAK LINESKEPLG NTALHLCCKY  60
   61 GSWEVLDKIL DQDGEIEIDP QNDVDGDTPL HVTVRYSQEE PEHGTFIARN LIEVGADPRV 120
  121 RNYNNQKPVD LVHGDELDEL IDLLQGAELA IDSTNGSGDN NEDGEMIDDG PSDDDEEDDK 180
  181 K

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) CMD1 MYO5 YGL242C
    View Details Krogan NJ, et al. (2006) CMD1 CMK1 CMK2 CMP2 CNA1 CNB1 MYO3 MYO5 YGL242C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] PSI-BLAST 30.154902 GA bindinig protein (GABP) beta 1
    2 View Details [89..181] PSI-BLAST 30.154902 GA bindinig protein (GABP) beta 1


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle