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Protein Overview: RRT6

General Information:
Name(s) found: RRT6 / YGL146C [SGD]
Description(s) found:
Found 29 descriptions.
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  • Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; contains two putative transmembrane spans, but no significant homology to other known proteins [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: membrane [NASLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKASLNIAQ TKEIPLTDRR MGLRGWKACS RPHLLGRILL FMSILFITSA ELSSDVSSRE  60
   61 VYMPIFNNKL SFKVPPIKRS LLLGAALYED FEYSSNNSAS DGAFCTVFNA GMNDASREVV 120
  121 FEIHVMDVLQ EETDSSRFGG TSHERGRQSL GFSVFNNKNG DLLRSKKNLA SGTSVIEVNP 180
  181 GNCNEFLICF INLVYDGSWS SIDTEKSVTI KMTYNDKLDP DMLLHLVNQM TPQVVKALNT 240
  241 VSDGLFQIVS DTTLLQMESD RRDINEATYS YLIVGFVSLM VAQLISNIIV TTYLIIKIKS 300
  301 NPSSHIKKKG L

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) ACO1 AVO1 CIC1 DNL4 GDE1 HTA1 KGD1 MAK16 NOP15 NOP2 NOP58 NOP7 NSA1 PRO1 RPF2 RRP9 RRT6 TIF6 UTP20 YTM1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle