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Protein Overview: SDS23

General Information:
Name(s) found: SDS23 / YGL056C [SGD]
Description(s) found:
Found 23 descriptions.
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  • One of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; involved in cell separation during budding [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 527 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    cytoplasm [IDALink to PubMed articleLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQNTRHTSI VEMLSTPPQL PNSTDLNSLS EQTDKNTEAN KSDTESLHKS ISKSSSSSSL  60
   61 STLDNTEYSN NNGNSLSTLN SQNLLSVHRQ EWQHTPLSNL VEQNKLIFIR GSISVEEAFN 120
  121 TLVKHQLTSL PVENFPGDMN CLTFDYNDLN AYLLLVLNRI KVSNDKITSD CQNGKSVPVA 180
  181 EIVKLTPKNP FYKLPETENL STVIGILGSG VHRVAITNVE MTQIKGILSQ RRLIKYLWEN 240
  241 ARSFPNLKPL LDSSLEELNI GVLNAARDKP TFKQSRVISI QGDEHLIMAL HKMYVERISS 300
  301 IAVVDPQGNL IGNISVTDVK HVTRTSQYPL LHNTCRHFVS VILNLRGLET GKDSFPIFHV 360
  361 YPTSSLARTF AKLVATKSHR LWIVQPNDNQ PTASSEKSSS PSPSTPPVTT LPSLASSYHS 420
  421 NTQSSRMANS PVLKSSDTSN NKINVNINLS GPSPSQPQSP SATMPPPQSP SNCPASPTPA 480
  481 HFEKEYRTGK LIGVVSLTDI LSVLARKQTH HKEIDPQMAR KQRGHIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data SDS23 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92]
    [235..466]    		 PSI-BLAST 41.09691 Inosine monophosphate dehydrogenase (IMPDH); Type II inosine monophosphate dehydrogenase
    2 View Details [93..234] PSI-BLAST 41.09691 Inosine monophosphate dehydrogenase (IMPDH); Type II inosine monophosphate dehydrogenase
    3 View Details [467..527] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle