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Protein Overview: TRS31

General Information:
Name(s) found: TRS31 / YDR472W [SGD]
Description(s) found:
Found 32 descriptions.
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  • One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates vesicle docking and fusion; involved in endoplasmic reticulum (ER) to Golgi membrane traffic [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: TRAPP complex [IDALink to PubMed article]
    Biological Process: ER to Golgi vesicle-mediated transport [IMPLink to PubMed article]
    Molecular Function: Ras guanyl-nucleotide exchange factor activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQRIIQPSA SDQQFPGKSD GYEYTVGPKQ AITSEASTTY IPSRIYSESL LFKRQEASLS  60
   61 AMAFLFQEMI SQLHRTCKTA GDFETKLSDY GHNIGIRLLE LLNFRASVSP SSLPRASAFL 120
  121 SQNESSSKLS NASNSPGMLA NSSTATSASA NERLQEKQTE SLSNYITKMR RRDLKILDIL 180
  181 QFIHGTLWSY LFNHVSDDLV KSSERDNEYM IVDNFPTLTQ FIPGENVSCE YFVCGIIKGF 240
  241 LFNAGFPCGV TAHRMPQGGH SQRTVYLIQF DRQVLDREGL RFG

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) BET3 BET5 GSG1 KRE11 TRS120 TRS130 TRS20 TRS23 TRS31 TRS33
    View Details (MIPS) Mewes HW, et al. (2004) BET3 BET5 GSG1 KRE11 TRS120 TRS130 TRS20 TRS23 TRS31 TRS33
    View Details Krogan NJ, et al. (2006) TRS120 TRS23 TRS31 TRS33
    View Details Gavin AC, et al. (2006) BET3 BET5 GSG1 KRE11 TRS120 TRS130 TRS20 TRS23 TRS31 TRS33
    View Details Gavin AC, et al. (2002) BET3 BET5 FKS1 GSG1 KRE11 RVB2 SKN1 TRS120 TRS130 TRS20 TRS23 TRS31 TRS33
    View Details Qiu et al. (2008) BET3 BET5 GSG1 GYP6 KRE11 SED5 TRS120 TRS130 TRS20 TRS23 TRS31 TRS33 YOS1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data TRS31 Huh WK, et al. (2003)
    View Data TRS31 and CHC1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] MSA 1.006997 View MSA. No confident structure predictions are available.
    2 View Details [149..283] MSA 4.009966 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • Rab guanyl-nucleotide exchange factor activity
    		•  5.6079912636527 bayes_pls_golite062009
  • binding
    		•  1.61860097455426 bayes_pls_golite062009
  • protein binding
    		•  0.704339182896017 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle