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Protein Overview: TRM1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BOI1 Sample boi1 with gst from october 2005 McCusker D, et al (2007)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TRM1 and NIC96 Huh WK, et al. (2003)
View Data TRM1 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..264] PSI-BLAST 17.154902 Protein-L-isoaspartyl O-methyltransferase
2 View Details [265..570] MSA 2.116946 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • methyltransferase activity
  • 4.15445027778357 bayes_pls_golite062009
  • N-methyltransferase activity
  • 4.07806017452628 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
  • 4.07153733729662 bayes_pls_golite062009
  • protein methyltransferase activity
  • 3.92746815303714 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
  • 3.39429041855776 bayes_pls_golite062009
  • RNA methyltransferase activity
  • 3.07428840534971 bayes_pls_golite062009
  • histone methyltransferase activity
  • 2.99461585647365 bayes_pls_golite062009
  • tRNA methyltransferase activity
  • 2.5931020126592 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
  • 2.44201549586712 bayes_pls_golite062009
  • arginine N-methyltransferase activity
  • 2.41876112831625 bayes_pls_golite062009
  • protein-arginine N-methyltransferase activity
  • 2.41876112831625 bayes_pls_golite062009
  • DNA-methyltransferase activity
  • 2.39581687084457 bayes_pls_golite062009
  • rRNA methyltransferase activity
  • 2.29640050660273 bayes_pls_golite062009
  • transferase activity
  • 2.22303238506686 bayes_pls_golite062009
  • histone-arginine N-methyltransferase activity
  • 2.04296107639729 bayes_pls_golite062009
  • tRNA (cytosine)-methyltransferase activity
  • 1.88889414729709 bayes_pls_golite062009
  • tRNA (cytosine-5-)-methyltransferase activity
  • 1.88889414729709 bayes_pls_golite062009
  • protein-arginine omega-N monomethyltransferase activity
  • 1.66871163498737 bayes_pls_golite062009
  • tRNA (guanine-N2-)-methyltransferase activity
  • 1.5444293148467 bayes_pls_golite062009
  • tRNA (adenine-N1-)-methyltransferase activity
  • 1.29759910099835 bayes_pls_golite062009
  • tRNA (adenine)-methyltransferase activity
  • 1.29759910099835 bayes_pls_golite062009
  • catalytic activity
  • 1.25333584501255 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
  • 1.1103522853299 bayes_pls_golite062009
  • transcription regulator activity
  • 0.914549843668268 bayes_pls_golite062009
  • protein-arginine omega-N asymmetric methyltransferase activity
  • 0.89325812193225 bayes_pls_golite062009
  • DNA binding
  • 0.86027591375666 bayes_pls_golite062009
  • site-specific DNA-methyltransferase (adenine-specific) activity
  • 0.703178429468566 bayes_pls_golite062009
  • nucleic acid binding
  • 0.616949327277483 bayes_pls_golite062009
  • rRNA (adenine) methyltransferase activity
  • 0.533090627724779 bayes_pls_golite062009
  • rRNA (adenine-N6,N6-)-dimethyltransferase activity
  • 0.455449410561251 bayes_pls_golite062009
  • RNA binding
  • 0.417524996559564 bayes_pls_golite062009
  • binding
  • 0.383237930789959 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle