Protein Overview: SNF11

General Information:
Name(s) found:	SNF11 / YDR073W [SGD]
Description(s) found: Found 32 descriptions. SHOW ALL	Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p [SGD]
Organism:	Saccharomyces cerevisiae
Length:	169 amino acids
Gene Ontology:
Cellular Component:	SWI/SNF complex [TAS] chromatin remodeling complex [TAS]
Biological Process:	chromatin remodeling [TAS]
Molecular Function:	general RNA polymerase II transcription factor activity [TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEIAYSNT NTNTENENRN TGAGVDVNTN ANANANATAN ATANATANAT AELNLPTVDE  60
   61 QRQYKVQLLL HINSILLARV IQMNNSLQNN LQNNINNSNN NNIIRIQQLI SQFLKRVHAN 120
  121 LQCISQINQG VPSAKPLILT PPQLANQQQP PQDILSKLYL LLARVFEIW

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Riffle et al. (2010) (Unpublished Data)		ARP7 SNF11 SNF12 SNF5 SNF6
View Details	(MIPS) Mewes HW, et al. (2004)		ARP7 ARP9 SNF11 SNF12 SNF2 SNF5 SNF6 SWI1 SWI3 TAF14
View Details	Gavin AC, et al. (2006)		ARP9 SNF11 SNF12 SNF5 SNF6 SWI1 SWI3
View Details	Qiu et al. (2008)		ARP7 ARP9 SNF11 SNF12 SNF2 SNF5 SNF6 SWI1 SWP82 TAF14

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	NPA3	SNF11	2	Unpublished Fields Lab Data
View Screen	SAM35	SNF11	2	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	SNF11	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..169]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2