Protein Overview: YDL176W

General Information:
Name(s) found:	YDL176W [SGD]
Description(s) found: Found 26 descriptions. SHOW ALL	Protein of unknown function, predicted by computational methods to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; interacts with components of the GID complex; YDL176W is not an essential gene [SGD]
Organism:	Saccharomyces cerevisiae
Length:	708 amino acids
Gene Ontology:
Cellular Component:	cellular_component [ND]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGRIQFAV STPCNTKGKP SGYRLFEFKN DRLALVPSER GCTKVDVNAN IQAFCYLRPN  60
   61 GRDTSISPDA THILDSCDYM VLAKSNGFIE IISNYQYKIK NGLRLAPSYI LRCTPEDFES 120
  121 NFFSDYMIAG LEYSQGLLYC CMCSGRIYVF VMNLPTDYIQ YKNMYNPMFP DCFFKVHHDN 180
  181 NTTHSSEEEK LFEGSTRYTG RSCSKHICYF LLPIEPSHLR SSPVVSSFCN MYQGLPIYRP 240
  241 SMYLHIERGI STFHINPLDR FCFMTVSPRS PLFIRKIILP LTYVTFLSTF ISLKNSIQGD 300
  301 TCGEILSWDN VAQQNGFGSL FSWISNKFTF DTDIINSTIW DDIVKYSGTG MLDSGIVWKQ 360
  361 RQGHAKDDIY ELFHTQDMLG SSRRNSSFST ASSEPRPLSR RRRESFQALT RDAFRERMDV 420
  421 PCSTKWELDS FIRGLRRNTF MVDFEIVEKI SHRNGNDGVN EDDNTTDESD ETMTSFLTDN 480
  481 YKKMDIVCID HFVTLSAFRP RYYDEPIIKI DSLSNKNGSE NGTNEEEWAE SQMKVDGQVI 540
  541 DDETAQFKQA LGNLCSFKKL FMLDDSLCFI LDTHGVLLIN RFEIKNTKNL LRNSKDTIRI 600
  601 IPHDFGLIND TIVIINDIDV GTDNVCALTF HLVVTSMAGE ITVLKGEFFK NCRLGRIKLC 660
  661 DSLKLNRKDR FVDKLALIDY DGLNAQKRRL DYDEKDLYTF IVKKVKRD

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Riffle et al. (2010) (Unpublished Data)		FYV10 GID8 RMD5 VID28 VID30 YDL176W
View Details	Krogan NJ, et al. (2006)		FYV10 GID7 GID8 RMD5 VID24 VID28 VID30 YDL176W

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	None Entered	#17 Mitotic Prep3-TiO2 Phosphopeptide enrichment	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	TAM41	YDL176W	2	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YDL176W	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..708]	deduced	N/A	No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.90

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2