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Protein Overview: gi|30259414, gi|...

General Information:
Name(s) found: gi|30264739 [NCBI NR]
gi|30259414 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30264739|ref|NP_847116.1| acetoin utilization protein AcuC [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259414|gb|AAP28602.1| acetoin utilization protein AcuC [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: generation of precursor metabolites and energy [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAFIYSDD FRGYSFSPDH PFNQLRVTLT YDLLQKGGFI SPSQIISPRM ATDEEIAYIH  60
   61 TEEYINAVKR AGEGKLEKSI AMTYGLGTED TPMFPNMHEA SALLVGGTLT AVDAVLSGKV 120
  121 KHALNLGGGL HHGFRGKASG FCIYNDSSIA MKYIQKKYGL RVLYIDTDAH HGDGVQWSFY 180
  181 DDPNVCTISL HETGRYLFPG TGAVNERGQG NGYSYSFNVP LDAFTEDESF LDSYRTVVKE 240
  241 VAAYFKPDII LTQNGADAHY YDPLTHLCAT MNIYREIPKL AREIANEYCE GRWIAVGGGG 300
  301 YDHWRVVPRA WALIWLEMNN IQNISGYLPP EWIDAWKGQA ETELPLTWED PNNMYKPIPR 360
  361 KPEIEEKNAL TVAKSLEIIR NNMKKSLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..388] PSI-BLAST 87.522879 Crystal Structure of human HDAC8 complexed with Trichostatin A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein deacetylase activity
    		•  8.30253165870598 bayes_pls_golite062009
  • histone deacetylase activity
    		•  8.15565546801168 bayes_pls_golite062009
  • deacetylase activity
    		•  7.03701712157089 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  5.1590771772441 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  4.55604795512334 bayes_pls_golite062009
  • hydrolase activity
    		•  2.11707868768295 bayes_pls_golite062009
  • binding
    		•  1.80085909665797 bayes_pls_golite062009
  • NAD-dependent protein deacetylase activity
    		•  1.70542083582769 bayes_pls_golite062009
  • NAD-dependent histone deacetylase activity
    		•  1.70542083582769 bayes_pls_golite062009
  • catalytic activity
    		•  1.68836803454021 bayes_pls_golite062009
  • transcription factor binding
    		•  0.97845198395624 bayes_pls_golite062009
  • protein binding
    		•  0.932924391997764 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.886023992169206 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.59175938803562 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.480948003342456 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
    		•  0.436815987851993 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  0.396822865624511 bayes_pls_golite062009
  • DNA binding
    		•  0.20091997728132 bayes_pls_golite062009
  • chromatin binding
    		•  0.0976127981819213 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle