| Protein: | gi|30259414, gi|... |
| Organism: | Bacillus anthracis str. Ames |
| Length: | 388 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259414, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [5..385] | [13..413] |
|
|
0.0 | [5..361] | [13..387] |
|
|
0.0 | [5..361] | [13..387] |
|
|
0.0 | [5..361] | [13..387] |
|
|
0.0 | [5..361] | [13..387] |
|
|
0.0 | [5..361] | [13..387] |
|
|
0.0 | [5..361] | [13..387] |
|
Region A: Residues: [1-388] |
1 11 21 31 41 51
| | | | | |
1 MSSAFIYSDD FRGYSFSPDH PFNQLRVTLT YDLLQKGGFI SPSQIISPRM ATDEEIAYIH 60
61 TEEYINAVKR AGEGKLEKSI AMTYGLGTED TPMFPNMHEA SALLVGGTLT AVDAVLSGKV 120
121 KHALNLGGGL HHGFRGKASG FCIYNDSSIA MKYIQKKYGL RVLYIDTDAH HGDGVQWSFY 180
181 DDPNVCTISL HETGRYLFPG TGAVNERGQG NGYSYSFNVP LDAFTEDESF LDSYRTVVKE 240
241 VAAYFKPDII LTQNGADAHY YDPLTHLCAT MNIYREIPKL AREIANEYCE GRWIAVGGGG 300
301 YDHWRVVPRA WALIWLEMNN IQNISGYLPP EWIDAWKGQA ETELPLTWED PNNMYKPIPR 360
361 KPEIEEKNAL TVAKSLEIIR NNMKKSLY
|
| Detection Method: |  |
| Confidence: | 87.522879 |
| Match: | 1t64A |
| Description: | Crystal Structure of human HDAC8 complexed with Trichostatin A |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein deacetylase activity | 8.30253165870598 | bayes_pls_golite062009 |
| histone deacetylase activity | 8.15565546801168 | bayes_pls_golite062009 |
| deacetylase activity | 7.03701712157089 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 5.1590771772441 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 4.55604795512334 | bayes_pls_golite062009 |
| hydrolase activity | 2.11707868768295 | bayes_pls_golite062009 |
| binding | 1.80085909665797 | bayes_pls_golite062009 |
| NAD-dependent protein deacetylase activity | 1.70542083582769 | bayes_pls_golite062009 |
| NAD-dependent histone deacetylase activity | 1.70542083582769 | bayes_pls_golite062009 |
| catalytic activity | 1.68836803454021 | bayes_pls_golite062009 |
| transcription factor binding | 0.97845198395624 | bayes_pls_golite062009 |
| protein binding | 0.932924391997764 | bayes_pls_golite062009 |
| transcription regulator activity | 0.886023992169206 | bayes_pls_golite062009 |
| transcription repressor activity | 0.59175938803562 | bayes_pls_golite062009 |
| nucleic acid binding | 0.480948003342456 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | 0.436815987851993 | bayes_pls_golite062009 |
| histone methyltransferase activity | 0.396822865624511 | bayes_pls_golite062009 |
| DNA binding | 0.20091997728132 | bayes_pls_golite062009 |
| chromatin binding | 0.0976127981819213 | bayes_pls_golite062009 |
