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Protein Overview: gi|39995905, gi|...

General Information:
Name(s) found: gi|39995905 [NCBI NR]
gi|39982669 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|39995905|ref|NP_951856.1| amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982669|gb|AAR34129.1| amino acid ABC transporter, permease protein [Geobacter sulfurreducens PCA] [NCBI NR]
    • Organism: Geobacter sulfurreducens PCA
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: amino acid transport [ISSLink to PubMed article]
    Molecular Function: amino acid-transporting ATPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIAKLHFAA KEMDEALAAA REVLSLYPDN SEAKNFTASV EREKKPGYVT FLQDCLKFLP  60
   61 VLLKGAVMTL LLVLCTMFIS PIGGLLIALG RISTFRPLSA LCWFVIWLFR GTPLLLQLFF 120
  121 IYYGLPSLGI TLKPITAAVI GLGLNYSAYL GEIIRGAIQS IDHGQTEAAK ALGMTYGQTM 180
  181 RRVVIPQTYK RLMPPIGNEF IALIKDTALV STIAMVELMR AADQMFNTYF NVTALVLAAV 240
  241 IYLIFTTFFT FLFEKIEHRA GIYERR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] PSI-BLAST 16.154902 No description for 2onkC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.47791794099048 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.39634414867723 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  3.89128503869358 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  3.78071702105421 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  3.78024819585319 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  3.76710689838502 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  3.76710689838502 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  3.76480875126102 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.65928254714629 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.61840729006809 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  3.13976951511862 bayes_pls_golite062009
  • ATPase activity
    		•  2.90304684848114 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.85886572725081 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.78799656158331 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.76854894183109 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.76635806953632 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.42886654788147 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  1.77292242910033 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.77066316989042 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.54974155411368 bayes_pls_golite062009
  • hydrolase activity
    		•  1.52360037846731 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  1.35745015743741 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.96228415837358 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  0.702245581829122 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.69074662322395 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • catalytic activity
    		•  0.427775057748038 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.18066368771781 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  0.149318428666465 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  0.0202682073710961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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