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Protein Overview: gi|29541088, gi|...

General Information:
Name(s) found: gi|29653825 [NCBI NR]
gi|29541088 [NCBI NR]
Description(s) found:
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  • gi|29653825|ref|NP_819517.1| arginine ABC transporter periplasmic arginine-binding protein [Coxiella burnetii RSA 493] [NCBI NR]
  • gi|29541088|gb|AAO90031.1| arginine-binding protein [Coxiella burnetii RSA 493] [NCBI NR]
  • amino acid ABC transporter, periplasmic amino acid-binding protein [Coxiella burnetii RSA 493]gi|29541088|gb|AAO90031.1| amino acid ABC transporter, periplasmic amino acid-binding protein [Coxiella burnetii RSA 493] [nrdb_11152004_Chlamydomonas]
  • amino acid ABC transporter, periplasmic amino acid-binding protein [Coxiella burnetii RSA 493] [nr-271106-contam.fasta]
    • Organism: Coxiella burnetii RSA 493
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: amino acid transport [ISSLink to PubMed article]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISSLink to PubMed article]
    binding [ISSLink to PubMed article]
    amino acid-transporting ATPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNNNRAVS RFFRWIPAFV RMTGTFYFVS CLFVSPVFAT DTIKFATEAT YPPYVYMGPS  60
   61 GQVEGFGADI VKAVCKQMQA VCTISNQPWD SLIPSLKLGK FDALFGGMNI TTARQKEVDF 120
  121 TDPYYTNSVS FIADKNTPLT LSKQGLKGKI IGVQGGTTFD SYLQDSFGNS ITIQRYPSEE 180
  181 DALMDLTSGR VDAVVGDTPL IKQWLKQNGR REYVLIGKPV NDPNYFGKGV GIAVKKGNQA 240
  241 LLLKLNKALA AIKANGVYAA IVQKYFGQE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 52.09691 Histidine-binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • amino acid transmembrane transporter activity
    		•  2.89507136131183 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.8505643526173 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  2.60409378812617 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.5640155514811 bayes_pls_golite062009
  • transporter activity
    		•  2.37767937786605 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.14027396604232 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.98824826924235 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  1.92247368464925 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  1.91778402126342 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  1.91458600392598 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  1.91458600392598 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  1.91424996753266 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
    		•  1.91134435333756 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  1.88766300630813 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.59154512845516 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.51716707550629 bayes_pls_golite062009
  • ATPase activity
    		•  1.44327228942016 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.36989838880058 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.33033652028872 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.31993399326424 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.31926578892427 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.88733921737959 bayes_pls_golite062009
  • binding
    		•  0.841985743602294 bayes_pls_golite062009
  • polyamine transmembrane transporter activity
    		•  0.82443378583023 bayes_pls_golite062009
  • amino acid binding
    		•  0.61855649036974 bayes_pls_golite062009
  • polyamine-transporting ATPase activity
    		•  0.605434747769831 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52200036125335 bayes_pls_golite062009
  • amine binding
    		•  0.48583609326514 bayes_pls_golite062009
  • catalytic activity
    		•  0.278324746769832 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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