YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29541088, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNNNRAVS RFFRWIPAFV RMTGTFYFVS CLFVSPVFAT DTIKFATEAT YPPYVYMGPS  60
   61 GQVEGFGADI VKAVCKQMQA VCTISNQPWD SLIPSLKLGK FDALFGGMNI TTARQKEVDF 120
  121 TDPYYTNSVS FIADKNTPLT LSKQGLKGKI IGVQGGTTFD SYLQDSFGNS ITIQRYPSEE 180
  181 DALMDLTSGR VDAVVGDTPL IKQWLKQNGR REYVLIGKPV NDPNYFGKGV GIAVKKGNQA 240
  241 LLLKLNKALA AIKANGVYAA IVQKYFGQE

Type	Start	End	Confidence
Signal Peptide	1	39	0.78
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	269	0.99