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Protein Overview: gi|24347328, gi|...

General Information:
Name(s) found: gi|24373129 [NCBI NR]
gi|24347328 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373129|ref|NP_717172.1| phosphate regulon sensor protein PhoR [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347328|gb|AAN54616.1|AE015602_2 phosphate regulon sensor protein PhoR [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phosphate transport [ISSLink to PubMed article]
    two-component signal transduction system (phosphorelay) [ISSLink to PubMed article]
    phosphate metabolic process [ISSLink to PubMed article]
    Molecular Function: two-component sensor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDSYSGYRL FTRLAVFLLL CLLIGLLVGN PLWILIIGLL GLVIWHYRQL ARLNFWLWRD  60
   61 RKLTPPQGSG SWEGVFNGIY RLQGKNRRRV GQLAALLGRF RQGAEALPDA AVVLDSEHNI 120
  121 LWCNKLAQLM LGFVWPQDNG QRIDNLIRHP DFSAYIKAGK YKEPLELTSP VSERRLLEIR 180
  181 IMAYGDRQLL LIARDITRIR QLEGMRKEFV ANVSHELKTP LTVLQGYLEM MQSMAEPDSM 240
  241 NAKPLALMQQ QTQRMQSMVE QLLVLSRIED AADIDLENTV NMSQLMDVLK EEAKALAKDK 300
  301 YELSFHCEPG LDSHGNELQL RSACSNLISN AIRYTEPGGK ISVQWRSVAT GGLFSVADTG 360
  361 EGIAPQHISR LTERFYRVDS ARSRQTGGSG LGLAIVKHAL SHHHSELNIS SELGKGSTFS 420
  421 FVIPQHLIER KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] deduced N/A No confident structure predictions are available.
    2 View Details [76..181] FFAS03 3.72 Histidine kinase FixL heme domain
    3 View Details [182..432] PSI-BLAST 50.69897 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ion transmembrane transporter activity
    		•  1.81312487233411 bayes_pls_golite062009
  • binding
    		•  1.67984576110273 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.60314341650446 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.41577088905201 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.40823491489039 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.10325694432704 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.931375605669218 bayes_pls_golite062009
  • protein binding
    		•  0.888256242702267 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.563198063703829 bayes_pls_golite062009
  • potassium channel activity
    		•  0.563028071397075 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.552480950289765 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  0.551619757281389 bayes_pls_golite062009
  • DNA binding
    		•  0.533187513797767 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  0.532581714382914 bayes_pls_golite062009
  • ion channel activity
    		•  0.483348490364346 bayes_pls_golite062009
  • two-component sensor activity
    		•  0.466388018187262 bayes_pls_golite062009
  • protein histidine kinase activity
    		•  0.452475261443277 bayes_pls_golite062009
  • cation channel activity
    		•  0.445728116294453 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
    		•  0.409938237891918 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.391671932145714 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.388177774524707 bayes_pls_golite062009
  • channel activity
    		•  0.388177774524707 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.387046112137798 bayes_pls_golite062009
  • gated channel activity
    		•  0.383085563903689 bayes_pls_golite062009
  • signal transducer activity
    		•  0.341738261779128 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.341738261779128 bayes_pls_golite062009
  • catalytic activity
    		•  0.335650048048265 bayes_pls_golite062009
  • transporter activity
    		•  0.308330515689802 bayes_pls_golite062009
  • transcription factor activity
    		•  0.15709070306709 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.154730712374367 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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