YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|18416060, gi|...

General Information:
Name(s) found: gi|18416060 [NCBI NR]
gi|15810437 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|18416060|ref|NP_567676.1| protein kinase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15810437|gb|AAL07106.1| putative serine/threonine kinase [Arabidopsis thaliana] [NCBI NR]
  • putative serine/threonine kinase [Arabidopsis thaliana]gi|18416060|ref|NP_567676.1| protein kinase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protein kinase, putative | chr4:12080123-12083719 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative serine/threonine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ signal transducer [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | PAS domain-containing protein tyrosine kinase family protein | chr4:12080112-12083708 FORWARD LENGTH=735 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • PAS domain-containing protein tyrosine kinase family protein OS=Arabidopsis thaliana GN=At4g23050 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of O82754, PAS domain-containing protein tyrosine kinase family protein OS=Arabidopsis thaliana GN=At4g23050 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 735 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [IEA]
    regulation of transcription, DNA-dependent [IEA]
    protein amino acid phosphorylation [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNNSESSL YQVLVEWCQR METSQARLRE DVDDLLLQEE SRTGKESATG LETDTEKEAE  60
   61 VEVEAEAADS WDNPTATWER AVSGFYFADS AYRTLMDSMG HAIHVTSAAS GEITFWSRSA 120
  121 ENLYHWYAEE VVGYRTIDVL VTEEYRNSLT GIRNRVCRGE TWTGQFPFQK KTGELFMALV 180
  181 TKSPVYENGE LVGVVTVSSD ATLFNRMHPL SNEHQQQARS NNRHESNLRK HQWHLPRPQI 240
  241 AAASQVPVVP QYSSAVASNL ASKLLPQRNG DDSFNGNHNS RSRDENVPVV ASTTFEKYGS 300
  301 LADKFLGKLQ RKITGSQGTE DNEPILRNGI NKSACGSGGS SKASNAVTCT AFRDNGNGKP 360
  361 KRAEVRISDV YGNGAEGLIH NGDRFQYIGN LGQSKPPRGL ESGLVSGMRG TKMSDLNGEI 420
  421 EDAWNTRLSV DPLPILGVNS GRQQSPVNQR NNRLVTDSSC EIRWEDLQLG EEVGRGSFAA 480
  481 VHRGVWNGSD VAIKVYFDGD YNAMTLTECK KEINIMKKLR HPNVLLFMGA VCTEEKSAII 540
  541 MEYMPRGSLF KILHNTNQPL DKKRRLRMAL DVARGMNYLH RRNPPIVHRD LKSSNLLVDK 600
  601 NWNVKVGDFG LSKWKNATFL STKSGKGTPQ WMAPEVLRSE PSNEKCDVFS FGVILWELMT 660
  661 TLVPWDRLNS IQVVGVVGFM DRRLDLPEGL NPRIASIIQD CWQTDPAKRP SFEELISQMM 720
  721 SLFRKPGSGA QEEDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..265] PSI-BLAST 13.39794 Histidine kinase FixL heme domain
    2 View Details [266..735] PSI-BLAST 78.0 Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.13193163173466 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.70252986729521 bayes_pls_golite062009
  • DNA binding
    		•  2.39469887155795 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.29452955279615 bayes_pls_golite062009
  • transcription factor binding
    		•  2.27361384249592 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.2024130901366 bayes_pls_golite062009
  • signal transducer activity
    		•  2.2024130901366 bayes_pls_golite062009
  • transcription factor activity
    		•  1.89800811088992 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  1.84495333812624 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  1.76137419624916 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  1.75817143121733 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  1.74541211573534 bayes_pls_golite062009
  • protein binding
    		•  1.73179783495389 bayes_pls_golite062009
  • receptor binding
    		•  1.69029242155978 bayes_pls_golite062009
  • potassium channel activity
    		•  1.66861564255579 bayes_pls_golite062009
  • protein kinase activity
    		•  1.65559891124729 bayes_pls_golite062009
  • cation channel activity
    		•  1.64216053542499 bayes_pls_golite062009
  • gated channel activity
    		•  1.57997822961427 bayes_pls_golite062009
  • transporter activity
    		•  1.5022765345883 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.42811662481453 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.41932160984714 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.3624777477825 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.34717038694478 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.31965099259799 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.31495158952249 bayes_pls_golite062009
  • channel activity
    		•  1.3085717642621 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.3085717642621 bayes_pls_golite062009
  • protein dimerization activity
    		•  1.3011414258578 bayes_pls_golite062009
  • receptor activity
    		•  1.28351761080137 bayes_pls_golite062009
  • kinase activity
    		•  1.27611499641469 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.26853844378696 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.25717484863319 bayes_pls_golite062009
  • ion channel activity
    		•  1.24513310126768 bayes_pls_golite062009
  • protein heterodimerization activity
    		•  1.21766200696893 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.14755671822257 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.12676145238081 bayes_pls_golite062009
  • transcription activator activity
    		•  0.97633367177523 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.73997979548384 bayes_pls_golite062009
  • histone acetyltransferase binding
    		•  0.537260205578471 bayes_pls_golite062009
  • transferase activity
    		•  0.511065872472486 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
    		•  0.50745973322658 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.318435462936997 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.2916280850979 bayes_pls_golite062009
  • transcription coactivator activity
    		•  0.21931306200834 bayes_pls_golite062009
  • receptor signaling protein activity
    		•  0.120871451768813 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle