| Protein: | gi|18416060, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 735 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18416060, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
464.0 | [0..1] | [735..1] |
|
Region A: Residues: [1-265] |
1 11 21 31 41 51
| | | | | |
1 MAGNNSESSL YQVLVEWCQR METSQARLRE DVDDLLLQEE SRTGKESATG LETDTEKEAE 60
61 VEVEAEAADS WDNPTATWER AVSGFYFADS AYRTLMDSMG HAIHVTSAAS GEITFWSRSA 120
121 ENLYHWYAEE VVGYRTIDVL VTEEYRNSLT GIRNRVCRGE TWTGQFPFQK KTGELFMALV 180
181 TKSPVYENGE LVGVVTVSSD ATLFNRMHPL SNEHQQQARS NNRHESNLRK HQWHLPRPQI 240
241 AAASQVPVVP QYSSAVASNL ASKLL
|
| Detection Method: |  |
| Confidence: | 13.39794 |
| Match: | 1d06A |
| Description: | Histidine kinase FixL heme domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.13193163173466 | bayes_pls_golite062009 |
| transcription regulator activity | 2.70252986729521 | bayes_pls_golite062009 |
| DNA binding | 2.39469887155795 | bayes_pls_golite062009 |
| nucleic acid binding | 2.29452955279615 | bayes_pls_golite062009 |
| transcription factor binding | 2.27361384249592 | bayes_pls_golite062009 |
| molecular transducer activity | 2.2024130901366 | bayes_pls_golite062009 |
| signal transducer activity | 2.2024130901366 | bayes_pls_golite062009 |
| transcription factor activity | 1.89800811088992 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 1.84495333812624 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 1.76137419624916 | bayes_pls_golite062009 |
| voltage-gated channel activity | 1.75817143121733 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 1.74541211573534 | bayes_pls_golite062009 |
| protein binding | 1.73179783495389 | bayes_pls_golite062009 |
| receptor binding | 1.69029242155978 | bayes_pls_golite062009 |
| potassium channel activity | 1.66861564255579 | bayes_pls_golite062009 |
| protein kinase activity | 1.65559891124729 | bayes_pls_golite062009 |
| cation channel activity | 1.64216053542499 | bayes_pls_golite062009 |
| gated channel activity | 1.57997822961427 | bayes_pls_golite062009 |
| transporter activity | 1.5022765345883 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.42811662481453 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.41932160984714 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.3624777477825 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.34717038694478 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.31965099259799 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.31495158952249 | bayes_pls_golite062009 |
| channel activity | 1.3085717642621 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.3085717642621 | bayes_pls_golite062009 |
| protein dimerization activity | 1.3011414258578 | bayes_pls_golite062009 |
| receptor activity | 1.28351761080137 | bayes_pls_golite062009 |
| kinase activity | 1.27611499641469 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.26853844378696 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.25717484863319 | bayes_pls_golite062009 |
| ion channel activity | 1.24513310126768 | bayes_pls_golite062009 |
| protein heterodimerization activity | 1.21766200696893 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 1.14755671822257 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.12676145238081 | bayes_pls_golite062009 |
| transcription activator activity | 0.97633367177523 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.73997979548384 | bayes_pls_golite062009 |
| histone acetyltransferase binding | 0.537260205578471 | bayes_pls_golite062009 |
| transferase activity | 0.511065872472486 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity, enhancer binding | 0.50745973322658 | bayes_pls_golite062009 |
| transcription repressor activity | 0.318435462936997 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.2916280850979 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.21931306200834 | bayes_pls_golite062009 |
| receptor signaling protein activity | 0.120871451768813 | bayes_pls_golite062009 |
|
Region A: Residues: [266-735] |
1 11 21 31 41 51
| | | | | |
1 PQRNGDDSFN GNHNSRSRDE NVPVVASTTF EKYGSLADKF LGKLQRKITG SQGTEDNEPI 60
61 LRNGINKSAC GSGGSSKASN AVTCTAFRDN GNGKPKRAEV RISDVYGNGA EGLIHNGDRF 120
121 QYIGNLGQSK PPRGLESGLV SGMRGTKMSD LNGEIEDAWN TRLSVDPLPI LGVNSGRQQS 180
181 PVNQRNNRLV TDSSCEIRWE DLQLGEEVGR GSFAAVHRGV WNGSDVAIKV YFDGDYNAMT 240
241 LTECKKEINI MKKLRHPNVL LFMGAVCTEE KSAIIMEYMP RGSLFKILHN TNQPLDKKRR 300
301 LRMALDVARG MNYLHRRNPP IVHRDLKSSN LLVDKNWNVK VGDFGLSKWK NATFLSTKSG 360
361 KGTPQWMAPE VLRSEPSNEK CDVFSFGVIL WELMTTLVPW DRLNSIQVVG VVGFMDRRLD 420
421 LPEGLNPRIA SIIQDCWQTD PAKRPSFEEL ISQMMSLFRK PGSGAQEEDD
|
| Detection Method: | |
| Confidence: | 78.0 |
| Match: | 1qcfA |
| Description: | Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck |
Matching Structure (courtesy of the PDB): |
|
