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Protein Overview: CDPKY_ARATH

General Information:
Name(s) found: CDPKY_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|91806884|gb|ABE66169.1| calcium-dependent protein kinase/CDPK [Arabidopsis thaliana] [NCBI NR]
  • gi|15239716|ref|NP_197437.1| CPK34; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|122249070|sp|Q3E9C0.1|CDPKY_ARATH RecName: Full=Calcium-dependent protein kinase 34 [NCBI NR]
  • Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1 [Swiss-Prot]
  • calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Calcium-dependent protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: CPK34 | CPK34 (calcium-dependent protein kinase 34); calmodulin-dependent protein kinase/ kinase | chr5:6521718-6523782 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • calcium-dependent protein kinase/CDPK [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • CPK34; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: CPK34 | calcium-dependent protein kinase 34 | chr5:6521716-6523780 REVERSE LENGTH=523 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 523 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    plasma membrane [IDA]
    Biological Process: protein amino acid phosphorylation [ISS]
    regulation of pollen tube growth [IMP]
    Molecular Function: ATP binding [IEA]
    calcium ion binding [IEA]
    protein kinase activity [IEA]
    calmodulin-dependent protein kinase activity [ISS]
    protein serine/threonine kinase activity [IEA]
    kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNCCSHGRD SDDNKEEPRP ENGGGGVGAA EASVRASKHP PASPPPATKQ GPIGPVLGRP  60
   61 MEDVKSSYTL GKELGRGQFG VTHLCTQKAT GLQFACKTIA KRKLVNKEDI EDVRREVQIM 120
  121 HHLTGQPNIV ELKGAYEDKH SVHLVMELCA GGELFDRIIA KGHYSERAAA SLLRTIVQII 180
  181 HTCHSMGVIH RDLKPENFLL LSKDENSPLK ATDFGLSVFY KPGEVFKDIV GSAYYIAPEV 240
  241 LRRKYGPEAD IWSIGVMLYI LLCGVPPFWA ESENGIFNAI LSGQVDFSSD PWPVISPQAK 300
  301 DLVRKMLNSD PKQRLTAAQV LNHPWIKEDG EAPDVPLDNA VMSRLKQFKA MNNFKKVALR 360
  361 VIAGCLSEEE IMGLKEMFKG MDTDNSGTIT LEELRQGLAK QGTRLSEYEV QQLMEAADAD 420
  421 GNGTIDYGEF IAATMHINRL DREEHLYSAF QHFDKDNSGY ITTEELEQAL REFGMNDGRD 480
  481 IKEIISEVDG DNDGRINYEE FVAMMRKGNP DPNPKKRREL SFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] PSI-BLAST 72.09691 No description for 2jc6A was found.
    2 View Details [108..381] FFAS03 10.1 CALMODULIN-DEPENDENT PROTEIN KINASE FROM RAT
    3 View Details [382..523] PSI-BLAST 23.09691 Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • phosphotransferase activity, alcohol group as acceptor
    		•  5.1266532460433 bayes_pls_golite062009
  • protein kinase activity
    		•  5.06553613807469 bayes_pls_golite062009
  • kinase activity
    		•  4.97217471277362 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  4.63130611618105 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  4.09005206351126 bayes_pls_golite062009
  • calmodulin-dependent protein kinase activity
    		•  4.05234521173026 bayes_pls_golite062009
  • transferase activity
    		•  3.71864228364346 bayes_pls_golite062009
  • binding
    		•  2.67450299947447 bayes_pls_golite062009
  • protein binding
    		•  2.2016624288568 bayes_pls_golite062009
  • tubulin binding
    		•  2.17977514833097 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.13652345199607 bayes_pls_golite062009
  • microtubule binding
    		•  1.88775178436595 bayes_pls_golite062009
  • ATP binding
    		•  1.74734232320398 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  1.71077512212789 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  1.68781845572802 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.65136036852775 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.54238193255857 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.45955619008784 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.45954404692843 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.44332631201954 bayes_pls_golite062009
  • nucleotide binding
    		•  1.43931752337662 bayes_pls_golite062009
  • DNA binding
    		•  1.4225378476001 bayes_pls_golite062009
  • insulin receptor substrate binding
    		•  1.38590736769351 bayes_pls_golite062009
  • actin binding
    		•  1.35764678903023 bayes_pls_golite062009
  • gamma-tubulin binding
    		•  1.22971419017172 bayes_pls_golite062009
  • catalytic activity
    		•  1.13659909751975 bayes_pls_golite062009
  • transcription factor activity
    		•  1.12734691449801 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  1.07654572354135 bayes_pls_golite062009
  • receptor signaling protein serine/threonine kinase activity
    		•  1.06242930071592 bayes_pls_golite062009
  • transcription activator activity
    		•  1.02847225770561 bayes_pls_golite062009
  • receptor signaling protein activity
    		•  0.989242693203213 bayes_pls_golite062009
  • transporter activity
    		•  0.580496499590986 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.561294047948865 bayes_pls_golite062009
  • MAP kinase activity
    		•  0.507543102601882 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.424938382645604 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.395297228560691 bayes_pls_golite062009
  • actin filament binding
    		•  0.245106394940513 bayes_pls_golite062009
  • protein complex binding
    		•  0.240494058155837 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
    		•  0.199802352672083 bayes_pls_golite062009
  • protein serine/threonine/tyrosine kinase activity
    		•  0.185239852962563 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.150412261639747 bayes_pls_golite062009
  • signal transducer activity
    		•  0.150412261639747 bayes_pls_golite062009
  • magnesium ion binding
    		•  0.134608114107045 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0793187210666157 bayes_pls_golite062009
  • MAP kinase kinase kinase activity
    		•  0.073383252842333 bayes_pls_golite062009
  • MAP kinase kinase activity
    		•  0.0583007878333612 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.00372971855400395 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle