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View Structure Prediction Details

Protein: FKB12_ARATH
Organism: Arabidopsis thaliana
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FKB12_ARATH.

Description E-value Query
Range
Subject
Range
gi|118649112, gi... - gi|118713573|ref|ZP_01566138.1| Peptidylprolyl isomerase [Burkholderia cenocepacia MC0-3], gi|118649...
gi|67656803, gi|... - gi|67656803|ref|ZP_00454184.1| Peptidylprolyl isomerase [Burkholderia cenocepacia AU 1054], gi|67095...
gi|67667692, gi|... - gi|67667692|ref|ZP_00464906.1| Peptidylprolyl isomerase [Burkholderia cenocepacia HI2424], gi|670987...
148.0 [0..2] [111..115]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVEKQVIRP GNGPKPAPGQ TVTVHCTGFG KDGDLSQKFW STKDEGQKPF SFQIGKGAVI  60
   61 KGWDEGVIGM QIGEVARLRC SSDYAYGAGG FPAWGIQPNS VLDFEIEVLS VQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.221849
Match: 1fkkA
Description: ATOMIC STRUCTURE OF FKBP12, AN IMMUNOPHILIN BINDING PROTEIN
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ryanodine-sensitive calcium-release channel activity 10.9968443145942 bayes_pls_golite062009
intracellular ligand-gated calcium channel activity 10.9968443145942 bayes_pls_golite062009
macrolide binding 7.31599503004442 bayes_pls_golite062009
FK506 binding 7.22442625476031 bayes_pls_golite062009
metal ion transmembrane transporter activity 6.74926751944787 bayes_pls_golite062009
calcium channel activity 6.4374377859142 bayes_pls_golite062009
cation channel activity 6.06732269872248 bayes_pls_golite062009
ion channel activity 5.45007096522107 bayes_pls_golite062009
passive transmembrane transporter activity 5.32426176964634 bayes_pls_golite062009
channel activity 5.32426176964634 bayes_pls_golite062009
substrate-specific channel activity 5.28960420749143 bayes_pls_golite062009
gated channel activity 5.28074654906904 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 4.0615867467963 bayes_pls_golite062009
cis-trans isomerase activity 3.99265212272703 bayes_pls_golite062009
ligand-gated channel activity 3.34717828007833 bayes_pls_golite062009
ligand-gated ion channel activity 3.34717828007833 bayes_pls_golite062009
ion transmembrane transporter activity 2.6566793500337 bayes_pls_golite062009
cation transmembrane transporter activity 2.61794461605199 bayes_pls_golite062009
calcium-release channel activity 2.58969194870156 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.47257819150887 bayes_pls_golite062009
isomerase activity 2.31710030777753 bayes_pls_golite062009
transcription regulator activity 1.85589011277711 bayes_pls_golite062009
receptor activity 1.78361575899771 bayes_pls_golite062009
transmembrane receptor activity 1.7459556028988 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.68688812199737 bayes_pls_golite062009
kinase activity 1.67904764195462 bayes_pls_golite062009
binding 1.63170667962375 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.57898291235576 bayes_pls_golite062009
signal transducer activity 1.53711974553033 bayes_pls_golite062009
molecular transducer activity 1.53711974553033 bayes_pls_golite062009
protein kinase activity 1.45320632553313 bayes_pls_golite062009
drug binding 1.39643621593407 bayes_pls_golite062009
transferase activity 1.34122735969662 bayes_pls_golite062009
receptor serine/threonine kinase binding 1.32709321745178 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase binding 1.32470025150272 bayes_pls_golite062009
transforming growth factor beta receptor binding 1.32470025150272 bayes_pls_golite062009
transporter activity 1.25197125648774 bayes_pls_golite062009
protein binding 1.08765413491791 bayes_pls_golite062009
SMAD binding 1.04905381164355 bayes_pls_golite062009
transmembrane transporter activity 1.03909235910355 bayes_pls_golite062009
catalytic activity 0.885282592863018 bayes_pls_golite062009
substrate-specific transporter activity 0.789390402522536 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.780499202755666 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 0.763739321802433 bayes_pls_golite062009
transforming growth factor beta receptor activity 0.763739321802433 bayes_pls_golite062009
intracellular ligand-gated ion channel activity 0.727019445105701 bayes_pls_golite062009
protein serine/threonine kinase activity 0.671059013500415 bayes_pls_golite062009
activin binding 0.33489895389042 bayes_pls_golite062009
unfolded protein binding 0.27473817613726 bayes_pls_golite062009
histone binding 0.221748741603068 bayes_pls_golite062009
transcription elongation regulator activity 0.21145105012677 bayes_pls_golite062009

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