| Protein: | osm-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 699 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for osm-3.
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..29] | [699..1] |
|
Region A: Residues: [1-416] |
1 11 21 31 41 51
| | | | | |
1 MAESVRVAVR CRPFNQREKD LNTTLCVGMT PNVGQVNLNA PDGAAKDFTF DGAYFMDSTG 60
61 EQIYNDIVFP LVENVIEGYN GTVFAYGQTG SGKTFSMQGI ETIPAQRGVI PRAFDHIFTA 120
121 TATTENVKFL VHCSYLEIYN EEVRDLLGAD NKQKLEIKEQ PDRGVYVAGL SMHVCHDVPA 180
181 CKELMTRGFN NRHVGATLMN KDSSRSHSIF TVYVEGMTET GSIRMGKLNL VDLAGSERQS 240
241 KTGATGDRLK EATKINLSLS ALGNVISALV DGKSKHIPYR DSKLTRLLQD SLGGNTKTIM 300
301 IACVSPSSDN YDETLSTLRY ANRAKNIKNK PTINEDPKDA LLREYQEEIA RLKSMVQPGA 360
361 VGVGAPAQDA FSIEEERKKL REEFEEAMND LRGEYEREQT SKAELQKDLE SLRADY
|
| Detection Method: |  |
| Confidence: | 89.0 |
| Match: | 1gojA |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 7.68336791348661 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 4.97507344344589 | bayes_pls_golite062009 |
| microfilament motor activity | 4.176620576177 | bayes_pls_golite062009 |
| motor activity | 4.04927796049806 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 2.77140616759165 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.71138928021716 | bayes_pls_golite062009 |
| tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
| transporter activity | 2.58140740499725 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.39695871109024 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.18396165590908 | bayes_pls_golite062009 |
| actin binding | 1.75397031486306 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.4691865989136 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.40384549325664 | bayes_pls_golite062009 |
| helicase activity | 1.33212695797068 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.29730375126024 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.906554174337376 | bayes_pls_golite062009 |
| nucleic acid binding | 0.777787753097919 | bayes_pls_golite062009 |
| actin filament binding | 0.728264616959762 | bayes_pls_golite062009 |
| beta-tubulin binding | 0.654735466720932 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.620212706423176 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.55593847647213 | bayes_pls_golite062009 |
| kinetochore binding | 0.505370954958131 | bayes_pls_golite062009 |
| microtubule-severing ATPase activity | 0.491769258942331 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.49000746592281 | bayes_pls_golite062009 |
| DNA binding | 0.479412476059825 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.355466224802969 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| transcription regulator activity | 0.312171320541728 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| protein transporter activity | 0.178442534411253 | bayes_pls_golite062009 |
| alpha-tubulin binding | 0.100557713995661 | bayes_pls_golite062009 |
| signal transducer activity | 0.0766574932313888 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0766574932313888 | bayes_pls_golite062009 |
| minus-end-directed microtubule motor activity | 0.068779631341469 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0254369227200564 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
|
Region A: Residues: [417-699] |
1 11 21 31 41 51
| | | | | |
1 ERANANLDNL NPEEAAKKIQ QLQDQFIGGE EAGNTQLKQK RMKQLKEAET KTQKLAAALN 60
61 VHKDDPLLQV YSTTQEKLDA VTSQLEKEVK KSKGYEREIE DLHGEFELDR LDYLDTIRKQ 120
121 DQQLKLLMQI MDKIQPIIKK DTNYSNVDRI KKEAVWNEDE SRWILPEMSM SRTILPLANN 180
181 GYMQEPARQE NTLLRSNFDD KLRERLAKSD SENLANSYFK PVKQINVINK YKSDQKLSTS 240
241 KSLFPSKTPT FDGLVNGVVY TDALYERAQS AKRPPRLASL NPK
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
