| Protein: | osm-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 671 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for osm-3.
| Description | E-value | Query Range |
Subject Range |
|
|
388.0 | [0..1] | [671..1] |
|
Region A: Residues: [1-299] |
1 11 21 31 41 51
| | | | | |
1 MTPNVGQVNL NAPDGAAKDF TFDGAYFMDS TGEQIYNDIV FPLVENVIEG YNGTVFAYGQ 60
61 TGSGKTFSMQ GIETIPAQRG VIPRAFDHIF TATATTENVK FLVHCSYLEI YNEEVRDLLG 120
121 ADNKQKLEIK EQPDRGVYVA GLSMHVCHDV PACKELMTRG FNNRHVGATL MNKDSSRSHS 180
181 IFTVYVEGMT ETGSIRMGKL NLVDLAGSER QSKTGATGDR LKEATKINLS LSALGNVISA 240
241 LVDGKSKHIP YRDSKLTRLL QDSLGGNTKT IMIACVSPSS DNYDETLSTL RYANRAKNI
|
| Detection Method: |  |
| Confidence: | 84.69897 |
| Match: | 1gojA |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 7.68336791348661 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 4.97507344344589 | bayes_pls_golite062009 |
| microfilament motor activity | 4.176620576177 | bayes_pls_golite062009 |
| motor activity | 4.04927796049806 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| actin-dependent ATPase activity | 2.77140616759165 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.71138928021716 | bayes_pls_golite062009 |
| tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
| transporter activity | 2.58140740499725 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.39695871109024 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.18396165590908 | bayes_pls_golite062009 |
| actin binding | 1.75397031486306 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.4691865989136 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.40384549325664 | bayes_pls_golite062009 |
| helicase activity | 1.33212695797068 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.29730375126024 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.906554174337376 | bayes_pls_golite062009 |
| nucleic acid binding | 0.777787753097919 | bayes_pls_golite062009 |
| actin filament binding | 0.728264616959762 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.620212706423176 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.55593847647213 | bayes_pls_golite062009 |
| kinetochore binding | 0.505370954958131 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.49000746592281 | bayes_pls_golite062009 |
| DNA binding | 0.479412476059825 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.355466224802969 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| transcription regulator activity | 0.312171320541728 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| protein transporter activity | 0.178442534411253 | bayes_pls_golite062009 |
| signal transducer activity | 0.0766574932313888 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0766574932313888 | bayes_pls_golite062009 |
| minus-end-directed microtubule motor activity | 0.068779631341469 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0254369227200564 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
|
Region A: Residues: [300-671] |
1 11 21 31 41 51
| | | | | |
1 KNKPTINEDP KDALLREYQE EIARLKSMVQ PGAVGVGAPA QDAFSIEEER KKLREEFEEA 60
61 MNDLRGEYER EQTSKAELQK DLESLRADYE RANANLDNLN PEEAAKKIQQ LQDQFIGGEE 120
121 AGNTQLKQKR MKQLKEAETK TQKLAAALNV HKDDPLLQVY STTQEKLDAV TSQLEKEVKK 180
181 SKGYEREIED LHGEFELDRL DYLDTIRKQD QQLKLLMQIM DKIQPIIKKD TNYSNVDRIK 240
241 KEAVWNEDES RWILPEMSMS RTILPLANNG YMQEPARQEN TLLRSNFDDK LRERLAKSDS 300
301 ENLANSYFKP VKQINVINKY KSDQKLSTSK SLFPSKTPTF DGLVNGVVYT DALYERAQSA 360
361 KRPPRLASLN PK
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
