YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE29587
Organism: Caenorhabditis elegans
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29587.

Description E-value Query
Range
Subject
Range
gi|7496336 - gi|7496336|pir||T15581 phosphoprotein phosphatase (EC 3.1.3.16) C23G10.1 [similarity] - Caenorhabdit...
367.0 [0..1] [456..1]

Back

Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKTRVPEV ADDCTKTVYP DPIPMPTCPQ LINDGTSCFL NIILQMLKRA NFHDHFKGDW  60
   61 QKGKQKMLMH KELQQIFNGK PGPKDVSRLR EMFSNEALKD GPHPLLVALK CLIKMSAVSD 120
  121 NDVIKEKGAR DKMFQKQSDE SN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.30103
Match: 1a17A
Description: TETRATRICOPEPTIDE REPEATS OF PROTEIN PHOSPHATASE 5
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.22791066554607 bayes_pls_golite062009
phosphatase activity 6.21754026490199 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.00674602220619 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.86006406811342 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.18314342778634 bayes_pls_golite062009
binding 2.71974493738804 bayes_pls_golite062009
protein binding 2.67835748923436 bayes_pls_golite062009
transcription regulator activity 2.36571535004008 bayes_pls_golite062009
DNA binding 1.95874073664777 bayes_pls_golite062009
nucleic acid binding 1.72745783719415 bayes_pls_golite062009
transcription factor activity 1.21805666483342 bayes_pls_golite062009
receptor activity 1.19949789380979 bayes_pls_golite062009
transferase activity 1.14940839435601 bayes_pls_golite062009
molecular transducer activity 1.12788325078271 bayes_pls_golite062009
signal transducer activity 1.12788325078271 bayes_pls_golite062009
oxidoreductase activity 0.967526235944614 bayes_pls_golite062009
transcription repressor activity 0.841959344808827 bayes_pls_golite062009
ligase activity 0.825764637499128 bayes_pls_golite062009
acetylglucosaminyltransferase activity 0.78476205818302 bayes_pls_golite062009
hydrolase activity 0.619711232527193 bayes_pls_golite062009
N-acetyltransferase activity 0.606264963283666 bayes_pls_golite062009
ubiquitin-protein ligase activity 0.532407342912695 bayes_pls_golite062009
transcription factor binding 0.518146612491969 bayes_pls_golite062009
RNA binding 0.497066934302855 bayes_pls_golite062009
signal sequence binding 0.49295886046194 bayes_pls_golite062009
procollagen-proline 4-dioxygenase activity 0.482467028485988 bayes_pls_golite062009
procollagen-proline dioxygenase activity 0.482467028485988 bayes_pls_golite062009
peptidyl-proline dioxygenase activity 0.482467028485988 bayes_pls_golite062009
peptidyl-proline 4-dioxygenase activity 0.482467028485988 bayes_pls_golite062009
enzyme binding 0.44905827271946 bayes_pls_golite062009
N-acyltransferase activity 0.370858685623455 bayes_pls_golite062009
transcription cofactor activity 0.30464889749774 bayes_pls_golite062009
peptide binding 0.280393897104229 bayes_pls_golite062009
enzyme regulator activity 0.192538429095884 bayes_pls_golite062009
transcription coactivator activity 0.116119418380222 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 0.114045878850001 bayes_pls_golite062009
transcription activator activity 0.0593768116971065 bayes_pls_golite062009
small GTPase binding 0.0394561704024805 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.0274922636265745 bayes_pls_golite062009
acetyltransferase activity 0.0233291331884218 bayes_pls_golite062009
GTPase binding 0.0230090675760397 bayes_pls_golite062009
GTPase regulator activity 0.0182110291463968 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [143-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMFAEHFIKT LLACKGMTKI RTMDIFRLIH ICKKIFTVQK SMVEIDGPVR ICGDLHGQYP  60
   61 DLIRLFAQVL GGFPPDSNYL FLGDYVDRGS FNLEVILLCL AYKARYPNNF MMLRGNHEVI 120
  121 HINEKYGFKD EVFNRKGEYH DELYPEFNEM MDMMPLVALV GGRILCMHGG LSQHIKSLDD 180
  181 LRNLRRPFHS EDECLENDIM WSDPAKVSGW TANPRGASVQ FGENEVKEMC KLLDIDLIVR 240
  241 GHQVVQDGYE FFAGKKLVTV FSAPHYMQSF TNSAAVCKVS AGLEVSFEVL KPEDIRVEEI 300
  301 KCSAESSCAS DMQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.09691
Match: 1it6A
Description: Protein phosphatase-1 (PP-1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 11.6417995308386 bayes_pls_golite062009
protein serine/threonine phosphatase activity 10.6440947462013 bayes_pls_golite062009
phosphatase activity 10.5525832502704 bayes_pls_golite062009
phosphoric ester hydrolase activity 10.3702645338723 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 9.02791306892273 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity 6.04386346716682 bayes_pls_golite062009
myosin phosphatase activity 5.31703100176823 bayes_pls_golite062009
hydrolase activity 3.13006743434485 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.68552051869632 bayes_pls_golite062009
kinase activity 1.67788383575784 bayes_pls_golite062009
structural molecule activity 1.5850868178597 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.57807175808088 bayes_pls_golite062009
protein kinase activity 1.4514460578232 bayes_pls_golite062009
binding 1.44538582463569 bayes_pls_golite062009
catalytic activity 1.39852585255405 bayes_pls_golite062009
transferase activity 1.3407391509244 bayes_pls_golite062009
protein binding 1.33435965029646 bayes_pls_golite062009
transporter activity 1.24767072239634 bayes_pls_golite062009
molecular transducer activity 1.08090214431427 bayes_pls_golite062009
signal transducer activity 1.08090214431427 bayes_pls_golite062009
calmodulin binding 0.77173071932406 bayes_pls_golite062009
protein serine/threonine kinase activity 0.66803085638835 bayes_pls_golite062009
substrate-specific transporter activity 0.528189469950839 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle