| Protein: | rad-51 |
| Organism: | Caenorhabditis elegans |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rad-51.
| Description | E-value | Query Range |
Subject Range |
|
|
309.0 | [0..56] | [394..2] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MGQSWGYEGI AKRSLCTHKW LYNLNLHSIN LFLPIESKMS AQASRQKKSD QEQRAADQAL 60
61 LNAAIEDNAM EQDE
|
| Detection Method: |  |
| Confidence: | 17.522879 |
| Match: | 1jweA |
| Description: | N-terminal domain of DnaB helicase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA helicase activity | 9.26997966081452 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 6.08870471440355 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 5.45262775532714 | bayes_pls_golite062009 |
| helicase activity | 4.28397455986496 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 3.663510450664 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 3.663510450664 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.97659021862014 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.94159549461095 | bayes_pls_golite062009 |
| hydrolase activity | 2.93824265320761 | bayes_pls_golite062009 |
| ATPase activity | 2.91512649893171 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.90294890063489 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.88373077621612 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.88156619844481 | bayes_pls_golite062009 |
| binding | 1.9180887037845 | bayes_pls_golite062009 |
| nucleic acid binding | 1.9087142423581 | bayes_pls_golite062009 |
| DNA binding | 1.87185414119548 | bayes_pls_golite062009 |
| catalytic activity | 1.58067730905989 | bayes_pls_golite062009 |
| protein binding | 1.45202848418786 | bayes_pls_golite062009 |
|
Region A: Residues: [75-395] |
1 11 21 31 41 51
| | | | | |
1 NFTVIDKLES SGISSGDISK LKEAGYYTYE SLAFTTRREL RNVKGISDQK AEKIMKEAMK 60
61 FVQMGFTTGA EVHVKRSQLV QIRTGSASLD RLLGGGIETG SITEVYGEYR TGKTQLCHSL 120
121 AVLCQLPIDM GGGEGKCMYI DTNATFRPER IIAIAQRYNM DSAHVLENIA VARAYNSEHL 180
181 MALIIRAGAM MSESRYAVVI VDCATAHFRN EYTGRGDLAE RQMKLSAFLK CLAKLADEYG 240
241 VAVIITNQVV AQVDGGASMF QADAKKPIGG HIIAHMSTTR LYLRKGKGEN RVAKMVQSPN 300
301 LPEAEATYSI TNHGIEDARE D
|
| Detection Method: | |
| Confidence: | 76.0 |
| Match: | 1szpA |
| Description: | A Crystal Structure of the Rad51 Filament |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| four-way junction helicase activity | 6.34056703603795 | bayes_pls_golite062009 |
| DNA helicase activity | 5.64236969551706 | bayes_pls_golite062009 |
| DNA clamp loader activity | 3.22518920754305 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 3.19273435123154 | bayes_pls_golite062009 |
| transporter activity | 3.13325129560423 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.92327745911863 | bayes_pls_golite062009 |
| motor activity | 2.79327761685782 | bayes_pls_golite062009 |
| microtubule motor activity | 2.74365461017633 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.69246499202248 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 2.66107861968804 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| bubble DNA binding | 2.62179925837003 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.61582393123755 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.59641929642359 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.59333672868803 | bayes_pls_golite062009 |
| hydrolase activity | 2.55157966585974 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| ATPase activity | 2.11122403732968 | bayes_pls_golite062009 |
| double-strand/single-strand DNA junction binding | 2.02697209084624 | bayes_pls_golite062009 |
| telomeric DNA binding | 1.98044285764127 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.8908019270286 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.40488517180956 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.37694050923424 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| protein transporter activity | 1.25342367751911 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| tubulin binding | 0.979946830272106 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.97700154207756 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| microtubule binding | 0.907162506177187 | bayes_pls_golite062009 |
| actin binding | 0.883285269827407 | bayes_pls_golite062009 |
| single-stranded telomeric DNA binding | 0.847538346941812 | bayes_pls_golite062009 |
| double-stranded telomeric DNA binding | 0.75018916645383 | bayes_pls_golite062009 |
| transcription activator activity | 0.739301862805678 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.725611289205392 | bayes_pls_golite062009 |
| nucleotide binding | 0.717697610309727 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.713814218071151 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.713752628021599 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.656009904481476 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.64416740142962 | bayes_pls_golite062009 |
| GTP binding | 0.643084645864898 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| recombinase activity | 0.45851158693664 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
| centromeric DNA binding | 0.322818640526369 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.208665086324262 | bayes_pls_golite062009 |
| ATP binding | 0.19169045543599 | bayes_pls_golite062009 |
| exodeoxyribonuclease V activity | 0.185603938981231 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.165732470448462 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.162060759063149 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.114463153989353 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.081265446432119 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.0378638259240902 | bayes_pls_golite062009 |
