| Protein: | rad15 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 772 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rad15.
| Description | E-value | Query Range |
Subject Range |
|
|
624.0 | [0..1] | [772..1] |
|
|
598.0 | [0..1] | [761..1] |
|
|
598.0 | [0..1] | [762..1] |
|
|
596.0 | [0..1] | [761..1] |
|
|
590.0 | [0..7] | [761..22] |
|
|
589.0 | [0..1] | [761..1] |
|
|
584.0 | [0..1] | [756..1] |
|
|
578.0 | [0..1] | [764..1] |
|
|
576.0 | [0..1] | [756..1] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MKFYIDDLPI LFPYPRIYPE QYQYMCDLKH SLDAGGIALL EMPSGTGKTI SLLSLIVSYQ 60
61 QHYPEHRKLI YCSRTMSEID KALAELKRLM A
|
| Detection Method: |  |
| Confidence: | 59.09691 |
| Match: | 2i4iA |
| Description: | No description for 2i4iA was found. |
|
Region A: Residues: [92-772] |
1 11 21 31 41 51
| | | | | |
1 YRTSQLGYEE PFLGLGLTSR KNLCLHPSVR REKNGNVVDA RCRSLTAGFV REQRLAGMDV 60
61 PTCEFHDNLE DLEPHSLISN GVWTLDDITE YGEKTTRCPY FTVRRMLPFC NVIIYSYHYL 120
121 LDPKIAERVS RELSKDCIVV FDEAHNIDNV CIESLSIDLT ESSLRKASKS ILSLEQKVNE 180
181 VKQSDSKKLQ DEYQKLVRGL QDANAANDED QFMANPVLPE DVLKEAVPGN IRRAEHFIAF 240
241 LKRFVEYLKT RMKVLHVIAE TPTSFLQHVK DITFIDKKPL RFCAERLTSL VRALQISLVE 300
301 DFHSLQQVVA FATLVATYER GFILILEPFE TENATVPNPI LRFSCLDASI AIKPVFERFR 360
361 SVIITSGTLS PLDMYPKMLQ FNTVMQESYG MSLARNCFLP MVVTRGSDQV AISSKFEARN 420
421 DPSVVRNYGN ILVEFSKITP DGLVAFFPSY LYLESIVSSW QSMGILDEVW KYKLILVETP 480
481 DPHETTLALE TYRAACSNGR GAVLLSVARG KVSEGVDFDH HYGRAVIMFG IPYQYTESRV 540
541 LKARLEFLRD TYQIREADFL TFDAMRHAAQ CLGRVLRGKD DHGIMVLADK RYGRSDKRTK 600
601 LPKWIQQYIT EGATNLSTDM SLALAKKFLR TMAQPFTASD QEGISWWSLD DLLIHQKKAL 660
661 KSAAIEQSKH EDEMDIDVVE T
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1d9zA |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 5.47805400577115 | bayes_pls_golite062009 |
| dATP binding | 3.90236137621968 | bayes_pls_golite062009 |
| adenyl deoxyribonucleotide binding | 2.90098016780049 | bayes_pls_golite062009 |
| purine deoxyribonucleotide binding | 2.90098016780049 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 2.72222787956584 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 2.60873257753475 | bayes_pls_golite062009 |
| hydrolase activity | 2.55157966585974 | bayes_pls_golite062009 |
| nucleic acid binding | 2.51683451033161 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| DNA binding | 2.12258000781149 | bayes_pls_golite062009 |
| transcription regulator activity | 2.09345198747025 | bayes_pls_golite062009 |
| endonuclease activity | 1.96689197136388 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| microtubule motor activity | 1.6537049553461 | bayes_pls_golite062009 |
| RNA helicase activity | 1.63960194106079 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.61735400124552 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.60404584546501 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 1.29640539057136 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| motor activity | 1.14667913749579 | bayes_pls_golite062009 |
| DNA clamp loader activity | 1.12431517057397 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 1.11383295816593 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| transcription activator activity | 0.889929694023098 | bayes_pls_golite062009 |
| transcription factor activity | 0.887108427603557 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.595694294246159 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.543891899378373 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.394186699348086 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.360529478474946 | bayes_pls_golite062009 |
| nucleotide binding | 0.354857598792381 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.35235724478784 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.352298062690593 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| DNA strand annealing activity | 0.283577486331079 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.26252931460003 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.243902356228423 | bayes_pls_golite062009 |
| exodeoxyribonuclease V activity | 0.185603938981231 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.181509771587324 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
