| Protein: | cbh1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 514 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cbh1.
| Description | E-value | Query Range |
Subject Range |
|
|
453.0 | [0..1] | [514..1] |
|
|
406.0 | [0..3] | [510..5] |
|
|
405.0 | [0..3] | [510..5] |
|
|
395.0 | [0..6] | [488..2] |
|
|
393.0 | [0..1] | [513..1] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MPPIRQAVSL AEKKAIRDYY NQSAHRIPQK EVTEWFRKTY NKDLSQSTIS EILSPKYSYL 60
61 DDGSVRLGDI KKIRAPKFPL LDNAVYEWLQ QREVEGLPIS GDMIKQAATR FWSKIPAYAS 120
121 LPLPDFS
|
| Detection Method: |  |
| Confidence: | 24.69897 |
| Match: | 1iufA |
| Description: | Ars-binding protein 1, ABP1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.13863038737912 | bayes_pls_golite062009 |
| DNA binding | 4.66369707598026 | bayes_pls_golite062009 |
| nucleic acid binding | 4.51452285155271 | bayes_pls_golite062009 |
| transcription factor activity | 4.06706589695599 | bayes_pls_golite062009 |
| transcription repressor activity | 3.55154985983449 | bayes_pls_golite062009 |
| binding | 3.02779747447702 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.41271657675151 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.26183812259792 | bayes_pls_golite062009 |
| transcription activator activity | 1.77700860354597 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.49423102874486 | bayes_pls_golite062009 |
| transcription factor binding | 1.40653841901929 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.24134446233807 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 1.14886080629275 | bayes_pls_golite062009 |
| centromeric DNA binding | 1.13545283098583 | bayes_pls_golite062009 |
| chromatin binding | 1.04132983826241 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.922310816608639 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.922310816608639 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.84983974758882 | bayes_pls_golite062009 |
| protein binding | 0.830419844171551 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.666799964992178 | bayes_pls_golite062009 |
| actin binding | 0.6102552688489 | bayes_pls_golite062009 |
| histone binding | 0.557787598121402 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.284650049512347 | bayes_pls_golite062009 |
| DNA helicase activity | 0.187022204923867 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.141400887946529 | bayes_pls_golite062009 |
| protein deacetylase activity | 0.13314897698019 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.105174598157041 | bayes_pls_golite062009 |
| histone deacetylase activity | 0.0878521297613482 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.00788099347317628 | bayes_pls_golite062009 |
|
Region A: Residues: [128-401] |
1 11 21 31 41 51
| | | | | |
1 NGWLDKFRRR HYIQQSAVNQ ALESIKFEVF REYPVHIQEF IRPYAQKDIF CVGGTSLFWK 60
61 LTPNKQNLDY QEIQGMKRGK AKVSLIMCCN ADGSERLPLW IVGYAQNPRS FEQCGIFPKS 120
121 MNFEWKWNGR ASISPIIMEE WLRWFDTRMQ GRKVLLMLES NDTYQFGVES VRRFKGGFQN 180
181 TSVFRIPEKT LDIKSPFEQG IVDTFKANYR RYWLQYSLNQ INILRDPLKA VNVLKAIRWM 240
241 LWSWNFGVSE KTIQASFLRS GLLGPHSEAE GQGM
|
| Detection Method: | |
| Confidence: | 1.43 |
| Match: | 2f7tA |
| Description: | No description for 2f7tA was found. |
|
Region A: Residues: [402-514] |
1 11 21 31 41 51
| | | | | |
1 ESYQKAIMEI GNLISSKGSE AVKQINEYIR PSEEDETKLH QDAVDTVAAE FLEERRFESD 60
61 EEEDVEPQIS NVEAAMAFEV LIKYFEQHEN GDPSFVLDLY RRQRVIAPNN LIA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
