| Protein: | FBpp0311070, svr-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0311070, svr-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
1052.0 | [0..21] | [1406..16] |
|
Region A: Residues: [1-447] |
1 11 21 31 41 51
| | | | | |
1 MPTLGLLFAS IGIAVLAMGV PHCRGYTIKE DESFLQQPHY ASQEQLEDLF AGLEKAYPNQ 60
61 AKVHFLGRSL EGRNLLALQI SRNTRSRNLL TPPVKYIANM HGDETVGRQL LVYMAQYLLG 120
121 NHERISDLGQ LVNSTDIYLV PTMNPDGYAL SQEGNCESLP NYVGRGNAAN IDLNRDFPDR 180
181 LEQSHVHQLR AQSRQPETAA LVNWIVSKPF VLSANFHGGA VVASYPYDNS LAHNECCEES 240
241 LTPDDRVFKQ LAHTYSDNHP IMRKGNNCND SFSGGITNGA HWYELSGGMQ DFNYAFSNCF 300
301 ELTIELSCCK YPAASTLPQE WQRNKASLLQ LLRQAHIGIK GLVTDASGFP IADANVYVAG 360
361 LEEKPMRTSK RGEYWRLLTP GLYSVHASAF GYQTSAPQQV RVTNDNQEAL RLDFKLAPVE 420
421 TNFDGNFRKV KVERSEPPQK LKKQFNG
|
| Detection Method: |  |
| Confidence: | 87.0 |
| Match: | 2nsmA |
| Description: | No description for 2nsmA was found. |
|
Region A: Residues: [448-827] |
1 11 21 31 41 51
| | | | | |
1 FLTPTKYEHH NFTAMESYLR AISSSYPSLT RLYSIGKSVQ GRDLWVLEIF ATPGSHVPGV 60
61 PEFKYVANMH GNEVVGKELL LILTKYMLER YGNDDRITKL VNGTRMHFLY SMNPDGYEIS 120
121 IEGDRTGGVG RANAHGIDLN RNFPDQYGTD RFNKVTEPEV AAVMNWTLSL PFVLSANLHG 180
181 GSLVANYPFD DNENDFNDPF MRLRNSSING RKPNPTEDNA LFKHLAGIYS NAHPTMYLGQ 240
241 PCELFQNEFF PDGITNGAQW YSVTGGMQDW NYVRAGCLEL TIEMGCDKFP KAAELSRYWE 300
301 DHREPLLQFI EQVHCGIHGF VHSTIGTPIA GAVVRLDGAN HSTYSQVFGD YWKLALPGRH 360
361 NLTVLGDNYA PLRMEVEVPD
|
| Detection Method: | |
| Confidence: | 85.0 |
| Match: | 1h8lA |
| Description: | Carboxypeptidase D, a regulatory domain; Carboxypeptidase D, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.786910294594 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.40766568731738 | bayes_pls_golite062009 |
| exopeptidase activity | 3.28577934113028 | bayes_pls_golite062009 |
| hydrolase activity | 2.98013991489506 | bayes_pls_golite062009 |
| metallopeptidase activity | 2.76103081380105 | bayes_pls_golite062009 |
| carboxypeptidase activity | 2.63658263814587 | bayes_pls_golite062009 |
| metalloexopeptidase activity | 1.76058821499096 | bayes_pls_golite062009 |
| metallocarboxypeptidase activity | 1.56827526553175 | bayes_pls_golite062009 |
| catalytic activity | 1.3989281287879 | bayes_pls_golite062009 |
| binding | 1.13031326446259 | bayes_pls_golite062009 |
| nucleic acid binding | 0.968016926667625 | bayes_pls_golite062009 |
| endopeptidase activity | 0.910234727191613 | bayes_pls_golite062009 |
| transcription regulator activity | 0.738552659762097 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.596149133958797 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.578572340123331 | bayes_pls_golite062009 |
| DNA binding | 0.508098629093675 | bayes_pls_golite062009 |
| cobalt ion binding | 0.373334141253719 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.0966237570696103 | bayes_pls_golite062009 |
|
Region A: Residues: [828-1213] |
1 11 21 31 41 51
| | | | | |
1 VHPFEMRMDI TLMPDDPQHW ASANDFRIIE NVVNTRYHTN PQVRARLAEL ENQNGQIASF 60
61 GYADSEFGTI FNYLKMTSDI GEPEEHKYKL LVVSSLYDTT APLGREILLN LIRHLVEGFK 120
121 LQDTSVVELL KRSVIYFLPQ TSKFQNVFDM YNSNTSICDP VLGDELAERI LGPETDQAKD 180
181 VFLQFLRSER FDLMLTFGAG NSDLNYPKGD SVLVKFAHRM QRTEFNYSPL QCPPSATRQL 240
241 HRETTERLTN MMYRIYNLPV YTLGISCCRM PHQKKIASVW RKNIDKIKNF LALVKTGVSG 300
301 LVQNDKGQPL REAYVRLLEH DRIINVTKNV ARFQLMLPHG LYGLEVTAPN YESQMIKVDV 360
361 EDGRVTELGI IRMHPFTLIR GVVLEL
|
| Detection Method: | |
| Confidence: | 8.5 |
| Match: | 2nsmA |
| Description: | No description for 2nsmA was found. |
|
Region A: Residues: [1214-1308] |
1 11 21 31 41 51
| | | | | |
1 PNNDNRATTS IAGVVLDESN HPVRNAKVSV VGQTQLRNFT GSMGQYRISA VPLGTITLKV 60
61 EAPRHLEATR QMHLIQGGLA TENVVFHLKV NEHVF
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 2b59B |
| Description: | The type II cohesin dockerin complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1309-1406] |
1 11 21 31 41 51
| | | | | |
1 GLPRFLFILC ASVLIIVGVI VCVLCAQFWF YRRHRGDKPY YNFSLLPQRG KEQFGLEDDD 60
61 GGDDGETELF RSPIKRELSQ RAHLVNNQTN YSFIIQAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
