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Protein Overview: svr-PD

General Information:
Name(s) found: svr-PD / FBpp0089123 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • The gene silver is referred to in FlyBase by the symbol Dmel\svr (CG4122, FBgn0004648). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:390504..403113. It has the cytological map location 1B5-1B7. There is experimental evidence that it has the molecular function</span>: carboxypeptidase activity; metallocarboxypeptidase activity. There is experimental evidence that it is involved in the biological process</span>: imaginal disc-derived wing morphogenesis; phagocytosis, engulfment. 62 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: adult segment; adult mesothoracic segment; organ system; thoracic segment; adult; region of integument; peripheral nervous system; nervous system; sensillum; wing vein L1; sense organ. It has 8 annotated transcripts and 8 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1404 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFFCLALII GCAVGEYSEV RVIQEEDNFL ESPHYLKNEE IGDLFSQLAK DYPDLAQTYT  60
   61 IGKSLEDRPI YALALSAPTG ESKNGDLLRP MVKLVANIQG DEAVGRQMVL YMAEYLATHY 120
  121 DGDPKVQALL NLTEIHFLPT CNPDGFAKAK EGNCESLPNY VGRGNAANID LNRDFPDRLE 180
  181 QSHVHQLRAQ SRQPETAALV NWIVSKPFVL SANFHGGAVV ASYPYDNSLA HNECCEESLT 240
  241 PDDRVFKQLA HTYSDNHPIM RKGNNCNDSF SGGITNGAHW YELSGGMQDF NYAFSNCFEL 300
  301 TIELSCCKYP AASTLPQEWQ RNKASLLQLL RQAHIGIKGL VTDASGFPIA DANVYVAGLE 360
  361 EKPMRTSKRG EYWRLLTPGL YSVHASAFGY QTSAPQQVRV TNDNQEALRL DFKLAPVETN 420
  421 FDGNFRKVKV ERSEPPQKLK KQFNGFLTPT KYEHHNFTAM ESYLRAISSS YPSLTRLYSI 480
  481 GKSVQGRDLW VLEIFATPGS HVPGVPEFKY VANMHGNEVV GKELLLILTK YMLERYGNDD 540
  541 RITKLVNGTR MHFLYSMNPD GYEISIEGDR TGGVGRANAH GIDLNRNFPD QYGTDRFNKV 600
  601 TEPEVAAVMN WTLSLPFVLS ANLHGGSLVA NYPFDDNEND FNDPFMRLRN SSINGRKPNP 660
  661 TEDNALFKHL AGIYSNAHPT MYLGQPCELF QNEFFPDGIT NGAQWYSVTG GMQDWNYVRA 720
  721 GCLELTIEMG CDKFPKAAEL SRYWEDHREP LLQFIEQVHC GIHGFVHSTI GTPIAGAVVR 780
  781 LDGANHSTYS QVFGDYWKLA LPGRHNLTVL GDNYAPLRME VEVPDVHPFE MRMDITLMPD 840
  841 DPQHWASAND FRIIENVVNT RYHTNPQVRA RLAELENQNG QIASFGYADS EFGTIFNYLK 900
  901 MTSDIGEPEE HKYKLLVVSS LYDTTAPLGR EILLNLIRHL VEGFKLQDTS VVELLKRSVI 960
  961 YFLPQTSKFQ NVFDMYNSNT SICDPVLGDE LAERILGPET DQAKDVFLQF LRSERFDLML1020
 1021 TFGAGNSDLN YPKGDSVLVK FAHRMQRTEF NYSPLQCPPS ATRQLHRETT ERLTNMMYRI1080
 1081 YNLPVYTLGI SCCRMPHQKK IASVWRKNID KIKNFLALVK TGVSGLVQND KGQPLREAYV1140
 1141 RLLEHDRIIN VTKNVARFQL MLPHGLYGLE VTAPNYESQM IKVDVEDGRV TELGIIRMHP1200
 1201 FTLIRGVVLE LPNNDNRATT SIAGVVLDES NHPVRNAKVS VVGQTQLRNF TGSMGQYRIS1260
 1261 AVPLGTITLK VEAPRHLEAT RQMHLIQGGL ATENVVFHLK VNEHVFGLPR FLFILCASVL1320
 1321 IIVGVIVCVL CAQFWFYRRH RGDKPYYNFS LLPQRGKEQF GLEDDDGGDD GETELFRSPI1380
 1381 KRELSQRAHL VNNQTNYSFI IQAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] PSI-BLAST 89.0 Human procarboxypeptidase A4.
    2 View Details [346..768] PSI-BLAST 90.045757 HUMAN PROCARBOXYPEPTIDASE A2
    3 View Details [769..860] PSI-BLAST 87.0 Carboxypeptidase D, a regulatory domain; Carboxypeptidase D, catalytic domain
    4 View Details [861..1218] FFAS03 8.75 No description for 2nsmA was found.
    5 View Details [1219..1331] FFAS03 2.29 No description for 2pz4A was found.
    6 View Details [1332..1404] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidase activity
    		•  4.786910294594 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  4.40766568731738 bayes_pls_golite062009
  • exopeptidase activity
    		•  3.28577934113028 bayes_pls_golite062009
  • hydrolase activity
    		•  2.98013991489506 bayes_pls_golite062009
  • metallopeptidase activity
    		•  2.76103081380105 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  2.63658263814587 bayes_pls_golite062009
  • metalloexopeptidase activity
    		•  1.76058821499096 bayes_pls_golite062009
  • metallocarboxypeptidase activity
    		•  1.56827526553175 bayes_pls_golite062009
  • catalytic activity
    		•  1.3989281287879 bayes_pls_golite062009
  • binding
    		•  1.13031326446259 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.968016926667625 bayes_pls_golite062009
  • endopeptidase activity
    		•  0.910234727191613 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.738552659762097 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.596149133958797 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.578572340123331 bayes_pls_golite062009
  • DNA binding
    		•  0.508098629093675 bayes_pls_golite062009
  • cobalt ion binding
    		•  0.373334141253719 bayes_pls_golite062009
  • aminopeptidase activity
    		•  0.0966237570696103 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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