| Protein: | svr-PD |
| Organism: | Drosophila melanogaster |
| Length: | 1404 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for svr-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
1040.0 | [0..1] | [1404..1] |
|
Region A: Residues: [1-345] |
1 11 21 31 41 51
| | | | | |
1 MLFFCLALII GCAVGEYSEV RVIQEEDNFL ESPHYLKNEE IGDLFSQLAK DYPDLAQTYT 60
61 IGKSLEDRPI YALALSAPTG ESKNGDLLRP MVKLVANIQG DEAVGRQMVL YMAEYLATHY 120
121 DGDPKVQALL NLTEIHFLPT CNPDGFAKAK EGNCESLPNY VGRGNAANID LNRDFPDRLE 180
181 QSHVHQLRAQ SRQPETAALV NWIVSKPFVL SANFHGGAVV ASYPYDNSLA HNECCEESLT 240
241 PDDRVFKQLA HTYSDNHPIM RKGNNCNDSF SGGITNGAHW YELSGGMQDF NYAFSNCFEL 300
301 TIELSCCKYP AASTLPQEWQ RNKASLLQLL RQAHIGIKGL VTDAS
|
| Detection Method: |  |
| Confidence: | 89.0 |
| Match: | 2boaA |
| Description: | Human procarboxypeptidase A4. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [346-768] |
1 11 21 31 41 51
| | | | | |
1 GFPIADANVY VAGLEEKPMR TSKRGEYWRL LTPGLYSVHA SAFGYQTSAP QQVRVTNDNQ 60
61 EALRLDFKLA PVETNFDGNF RKVKVERSEP PQKLKKQFNG FLTPTKYEHH NFTAMESYLR 120
121 AISSSYPSLT RLYSIGKSVQ GRDLWVLEIF ATPGSHVPGV PEFKYVANMH GNEVVGKELL 180
181 LILTKYMLER YGNDDRITKL VNGTRMHFLY SMNPDGYEIS IEGDRTGGVG RANAHGIDLN 240
241 RNFPDQYGTD RFNKVTEPEV AAVMNWTLSL PFVLSANLHG GSLVANYPFD DNENDFNDPF 300
301 MRLRNSSING RKPNPTEDNA LFKHLAGIYS NAHPTMYLGQ PCELFQNEFF PDGITNGAQW 360
361 YSVTGGMQDW NYVRAGCLEL TIEMGCDKFP KAAELSRYWE DHREPLLQFI EQVHCGIHGF 420
421 VHS
|
| Detection Method: | |
| Confidence: | 90.045757 |
| Match: | 1ayeA |
| Description: | HUMAN PROCARBOXYPEPTIDASE A2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.786910294594 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 4.40766568731738 | bayes_pls_golite062009 |
| exopeptidase activity | 3.28577934113028 | bayes_pls_golite062009 |
| hydrolase activity | 2.98013991489506 | bayes_pls_golite062009 |
| metallopeptidase activity | 2.76103081380105 | bayes_pls_golite062009 |
| carboxypeptidase activity | 2.63658263814587 | bayes_pls_golite062009 |
| metalloexopeptidase activity | 1.76058821499096 | bayes_pls_golite062009 |
| metallocarboxypeptidase activity | 1.56827526553175 | bayes_pls_golite062009 |
| catalytic activity | 1.3989281287879 | bayes_pls_golite062009 |
| binding | 1.13031326446259 | bayes_pls_golite062009 |
| nucleic acid binding | 0.968016926667625 | bayes_pls_golite062009 |
| endopeptidase activity | 0.910234727191613 | bayes_pls_golite062009 |
| transcription regulator activity | 0.738552659762097 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.596149133958797 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.578572340123331 | bayes_pls_golite062009 |
| DNA binding | 0.508098629093675 | bayes_pls_golite062009 |
| cobalt ion binding | 0.373334141253719 | bayes_pls_golite062009 |
| aminopeptidase activity | 0.0966237570696103 | bayes_pls_golite062009 |
|
Region A: Residues: [769-860] |
1 11 21 31 41 51
| | | | | |
1 TIGTPIAGAV VRLDGANHST YSQVFGDYWK LALPGRHNLT VLGDNYAPLR MEVEVPDVHP 60
61 FEMRMDITLM PDDPQHWASA NDFRIIENVV NT
|
| Detection Method: | |
| Confidence: | 87.0 |
| Match: | 1h8lA |
| Description: | Carboxypeptidase D, a regulatory domain; Carboxypeptidase D, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [861-1218] |
1 11 21 31 41 51
| | | | | |
1 RYHTNPQVRA RLAELENQNG QIASFGYADS EFGTIFNYLK MTSDIGEPEE HKYKLLVVSS 60
61 LYDTTAPLGR EILLNLIRHL VEGFKLQDTS VVELLKRSVI YFLPQTSKFQ NVFDMYNSNT 120
121 SICDPVLGDE LAERILGPET DQAKDVFLQF LRSERFDLML TFGAGNSDLN YPKGDSVLVK 180
181 FAHRMQRTEF NYSPLQCPPS ATRQLHRETT ERLTNMMYRI YNLPVYTLGI SCCRMPHQKK 240
241 IASVWRKNID KIKNFLALVK TGVSGLVQND KGQPLREAYV RLLEHDRIIN VTKNVARFQL 300
301 MLPHGLYGLE VTAPNYESQM IKVDVEDGRV TELGIIRMHP FTLIRGVVLE LPNNDNRA
|
| Detection Method: | |
| Confidence: | 8.75 |
| Match: | 2nsmA |
| Description: | No description for 2nsmA was found. |
|
Region A: Residues: [1219-1331] |
1 11 21 31 41 51
| | | | | |
1 TTSIAGVVLD ESNHPVRNAK VSVVGQTQLR NFTGSMGQYR ISAVPLGTIT LKVEAPRHLE 60
61 ATRQMHLIQG GLATENVVFH LKVNEHVFGL PRFLFILCAS VLIIVGVIVC VLC
|
| Detection Method: | |
| Confidence: | 2.29 |
| Match: | 2pz4A |
| Description: | No description for 2pz4A was found. |
|
Region A: Residues: [1332-1404] |
1 11 21 31 41 51
| | | | | |
1 AQFWFYRRHR GDKPYYNFSL LPQRGKEQFG LEDDDGGDDG ETELFRSPIK RELSQRAHLV 60
61 NNQTNYSFII QAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
