Protein: | gi|109072241 |
Organism: | Macaca mulatta |
Length: | 760 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|109072241.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [4..742] | [94..832] |
|
0.0 | [1..742] | [1..742] |
|
0.0 | [1..742] | [1..742] |
|
0.0 | [1..742] | [1..743] |
|
0.0 | [1..742] | [1..742] |
|
0.0 | [1..742] | [1..742] |
|
0.0 | [1..742] | [1..737] |
|
0.0 | [1..742] | [1..709] |
Region A: Residues: [1-99] |
1 11 21 31 41 51 | | | | | | 1 MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQN AEQIRLKNIR KVYGRCMWYR 60 61 LRLLKPQPNI IPTVKKIVLL AGWALFLFLA YKVSKTDRE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [100-219] |
1 11 21 31 41 51 | | | | | | 1 YQEYNPYEVL NLDPGATVAE IKKQYRLLSL KYHPDKGGDE VMFMRIAKAY AALTDEESRK 60 61 NWEEFGNPDG PQATSFGIAL PAWIVDQKNS ILVLLVYGLA FMVILPVVVG SWWYRSIRYS 120 121 |
Detection Method: | |
Confidence: | 20.30103 |
Match: | 1xblA |
Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
signal recognition particle binding | 4.18753628587547 | bayes_pls_golite062009 |
ribonucleoprotein binding | 2.20695097776982 | bayes_pls_golite062009 |
protein binding | 2.0077819170005 | bayes_pls_golite062009 |
binding | 1.75184008862922 | bayes_pls_golite062009 |
transporter activity | 1.29863098651348 | bayes_pls_golite062009 |
protein transporter activity | 0.939490372372376 | bayes_pls_golite062009 |
unfolded protein binding | 0.91241047562027 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.812144232432417 | bayes_pls_golite062009 |
heat shock protein binding | 0.796066295738949 | bayes_pls_golite062009 |
Region A: Residues: [220-497] |
1 11 21 31 41 51 | | | | | | 1 GDQILIRTTQ IYTYFVYKTR NMDMKRLIMV LAGASEFDPQ YNKDATSRPT DNILIPQLIR 60 61 EIGSINLKKN EPPLTCPYSL KARVLLLSHL ARMKIPETLE EDQQFMLKKC PALLQEMVNV 120 121 ICQLIVMARN REEREFRAPT LASLENCMKL SQMAVQGLQQ FKSPLLQLPH IEEDNLRRVS 180 181 NHKKYKIKTI QDLVSLKESD RHTLLHFLED EKYEEVMAVL GSFPYVTMDI KSQVLDDEDS 240 241 NNITVGSLVT VLVKLTRQTM AEVFEKEQSI CAAEEQPA |
Detection Method: | |
Confidence: | 56.69897 |
Match: | 2q0zX |
Description: | No description for 2q0zX was found. |
Term | Confidence | Notes |
ATPase activity, coupled | 2.2162185402774 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 2.00003070639929 | bayes_pls_golite062009 |
ATPase activity | 1.94063929259701 | bayes_pls_golite062009 |
pyrophosphatase activity | 1.93031967085303 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 1.91231918357992 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.90999409453671 | bayes_pls_golite062009 |
binding | 1.0900341502935 | bayes_pls_golite062009 |
hydrolase activity | 0.863470202460548 | bayes_pls_golite062009 |
protein binding | 0.843450745288021 | bayes_pls_golite062009 |
ATP-dependent helicase activity | 0.223800319644873 | bayes_pls_golite062009 |
purine NTP-dependent helicase activity | 0.223800319644873 | bayes_pls_golite062009 |
catalytic activity | 0.197884933993864 | bayes_pls_golite062009 |
helicase activity | 0.166899434976303 | bayes_pls_golite062009 |
ATP-dependent RNA helicase activity | 0.0561411188724552 | bayes_pls_golite062009 |
RNA-dependent ATPase activity | 0.0447036496272264 | bayes_pls_golite062009 |
Region A: Residues: [498-760] |
1 11 21 31 41 51 | | | | | | 1 EDGQGETNKN RTKGGWQQKS KGPKKTAKSK KKKPLKKKPT PVLLPQSKQQ KQKQANGVVG 60 61 NEAAVKEDEE EVSDKGSDSE EEETNRDSQS EKDDGSDRDS DREQDEKQNK DDEAEWQELQ 120 121 QSIQRKERAL LETKSKITHP VYSLYFPEEK QEWWWLYIAD RKEQTLISMP YHVCTLKDTE 180 181 EVELKFPAPG KPGNYQYTVF LRSDSYMGLD QIKPLKLEVH EAKPVPENHP QWDTAIEGDE 240 241 DQEDSEGFED SFEEEEEEEE DDD |
Detection Method: | |
Confidence: | 3.12 |
Match: | 2q0zX |
Description: | No description for 2q0zX was found. |
Term | Confidence | Notes |
ligand-gated channel activity | 3.84815857667697 | bayes_pls_golite062009 |
ligand-gated ion channel activity | 3.84815857667697 | bayes_pls_golite062009 |
transporter activity | 2.35657262831396 | bayes_pls_golite062009 |
transmembrane transporter activity | 2.25147059981728 | bayes_pls_golite062009 |
substrate-specific transporter activity | 2.22751878261824 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 2.14804562881998 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 2.08500207462933 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 2.02275538762334 | bayes_pls_golite062009 |
substrate-specific channel activity | 1.98975215032128 | bayes_pls_golite062009 |
channel activity | 1.98765540246813 | bayes_pls_golite062009 |
passive transmembrane transporter activity | 1.98765540246813 | bayes_pls_golite062009 |
voltage-gated cation channel activity | 1.95683546055804 | bayes_pls_golite062009 |
cation channel activity | 1.93647351989637 | bayes_pls_golite062009 |
potassium channel activity | 1.90735237063729 | bayes_pls_golite062009 |
ion channel activity | 1.90734204729298 | bayes_pls_golite062009 |
voltage-gated ion channel activity | 1.89680019328623 | bayes_pls_golite062009 |
voltage-gated channel activity | 1.89163382477908 | bayes_pls_golite062009 |
voltage-gated potassium channel activity | 1.87377069780892 | bayes_pls_golite062009 |
metal ion transmembrane transporter activity | 1.86336507935542 | bayes_pls_golite062009 |
gated channel activity | 1.80923664525859 | bayes_pls_golite062009 |
protein binding | 1.79910124244332 | bayes_pls_golite062009 |
binding | 1.71108326129383 | bayes_pls_golite062009 |
inward rectifier potassium channel activity | 1.30492997253657 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.405921935455161 | bayes_pls_golite062009 |