| Protein: | SMC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1230 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMC3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1230] | [1..1230] |
|
|
0.0 | [52..1093] | [867..1936] |
|
|
0.0 | [52..1093] | [870..1939] |
|
|
0.0 | [52..1095] | [870..1941] |
|
|
0.0 | [52..1093] | [869..1938] |
|
|
0.0 | [52..1095] | [867..1938] |
|
Region A: Residues: [1-50] |
1 11 21 31 41 51
| | | | | |
1 MYIKRVIIKG FKTYRNETII DNFSPHQNVI IGSNGSGKSN FFAAIRFVLS
|
| Detection Method: |  |
| Confidence: | 2.69897 |
| Match: | 1br2A_ |
| Description: | Myosin S1 fragment, N-terminal domain; Myosin S1, motor domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 4.51968578934603 | bayes_pls_golite062009 |
| motor activity | 4.04927796049806 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.16381244011837 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.11265775498161 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.11046854230259 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| actin binding | 1.75397031486306 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| hydrolase activity | 1.66122526893602 | bayes_pls_golite062009 |
| ATPase activity | 1.53315090215319 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 1.38366133153678 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 1.29640539057136 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| bubble DNA binding | 1.24175604630882 | bayes_pls_golite062009 |
| microfilament motor activity | 1.20923670094205 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| DNA clamp loader activity | 1.12431517057397 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| nucleic acid binding | 1.08697924060619 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| actin filament binding | 0.728264616959762 | bayes_pls_golite062009 |
| DNA binding | 0.702147676354075 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| recombinase activity | 0.45851158693664 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.442941451960958 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.440672169804309 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.440612929099368 | bayes_pls_golite062009 |
| nucleotide binding | 0.433111366205869 | bayes_pls_golite062009 |
| RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
| centromeric DNA binding | 0.322818640526369 | bayes_pls_golite062009 |
| transcription regulator activity | 0.312171320541728 | bayes_pls_golite062009 |
| mismatched DNA binding | 0.31144582840038 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
| four-way junction helicase activity | 0.26252931460003 | bayes_pls_golite062009 |
| exodeoxyribonuclease V activity | 0.185603938981231 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
|
Region A: Residues: [51-394] |
1 11 21 31 41 51
| | | | | |
1 DDYSNLKREE RQGLIHQGSG GSVMSASVEI VFHDPDHSMI LPSGVLSRGD DEVTIRRTVG 60
61 LKKDDYQLND RNVTKGDIVR MLETAGFSMN NPYNIVPQGK IVALTNAKDK ERLQLLEDVV 120
121 GAKSFEVKLK ASLKKMEETE QKKIQINKEM GELNSKLSEM EQERKELEKY NELERNRKIY 180
181 QFTLYDRELN EVINQMERLD GDYNNTVYSS EQYIQELDKR EDMIDQVSKK LSSIEASLKI 240
241 KNATDLQQAK LRESEISQKL TNVNVKIKDV QQQIESNEEQ RNLDSATLKE IKSIIEQRKQ 300
301 KLSKILPRYQ ELTKEEAMYK LQLASLQQKQ RDLILKKGEY ARFK
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [395-451] |
1 11 21 31 41 51
| | | | | |
1 SKDERDTWIH SEIEELKSSI QNLNELESQL QMDRTSLRKQ YSAIDEEIEE LIDSING
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.781 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.703 | a.4.1 | Homeodomain-like |
| View | Download | 0.765 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.648 | a.4.1 | Homeodomain-like |
| View | Download | 0.631 | a.4.1 | Homeodomain-like |
| View | Download | 0.621 | a.4.1 | Homeodomain-like |
| View | Download | 0.592 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.582 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.572 | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.563 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.558 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.555 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.535 | a.4.1 | Homeodomain-like |
| View | Download | 0.530 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.529 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.529 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.527 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.526 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.525 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.517 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.507 | a.4.1 | Homeodomain-like |
| View | Download | 0.504 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.503 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.498 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.487 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.473 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.471 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.467 | a.4.1 | Homeodomain-like |
| View | Download | 0.465 | a.4.1 | Homeodomain-like |
| View | Download | 0.457 | a.65.1 | Annexin |
| View | Download | 0.454 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.446 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.446 | a.4.1 | Homeodomain-like |
| View | Download | 0.444 | a.4.1 | Homeodomain-like |
| View | Download | 0.438 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.424 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.410 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.396 | a.30.1 | ROP protein |
| View | Download | 0.395 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.376 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.375 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.365 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.363 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.363 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.360 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.344 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.343 | a.4.1 | Homeodomain-like |
| View | Download | 0.334 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.334 | a.74.1 | Cyclin-like |
| View | Download | 0.334 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.332 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.331 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.329 | a.30.1 | ROP protein |
| View | Download | 0.328 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.326 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.324 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.321 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.318 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.318 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.317 | a.4.1 | Homeodomain-like |
| View | Download | 0.315 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.312 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.305 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.304 | a.4.1 | Homeodomain-like |
| View | Download | 0.303 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.300 | a.64.1 | Saposin |
| View | Download | 0.299 | a.4.1 | Homeodomain-like |
| View | Download | 0.297 | a.30.1 | ROP protein |
| View | Download | 0.297 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.291 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.291 | a.4.1 | Homeodomain-like |
| View | Download | 0.289 | a.74.1 | Cyclin-like |
| View | Download | 0.289 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.287 | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.281 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.281 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.280 | a.30.1 | ROP protein |
| View | Download | 0.280 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.279 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.279 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.271 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.270 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.266 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.265 | a.64.1 | Saposin |
| View | Download | 0.263 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.262 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.261 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.258 | a.145.1 | Flagellar transcriptional activator FlhD |
| View | Download | 0.258 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.256 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.255 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.251 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.251 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.251 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.248 | a.2.7 | tRNA-binding arm |
| View | Download | 0.247 | a.112.1 | Description not found. |
| View | Download | 0.246 | a.112.1 | Description not found. |
| View | Download | 0.245 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.237 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.235 | a.112.1 | Description not found. |
| View | Download | 0.233 | a.112.1 | Description not found. |
| View | Download | 0.232 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.231 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.231 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.230 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.228 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.226 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.224 | a.39.1 | EF-hand |
| View | Download | 0.222 | a.2.7 | tRNA-binding arm |
| View | Download | 0.218 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.218 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.217 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.216 | a.65.1 | Annexin |
| View | Download | 0.214 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.211 | a.39.1 | EF-hand |
| View | Download | 0.209 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.206 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.206 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.204 | d.59.1 | Ribosomal protein L30p/L7e |
| View | Download | 0.203 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.200 | a.4.11 | RNA polymerase subunit RPB10 |
| Term | Confidence | Notes |
| binding | 3.01984970042125 | bayes_pls_golite062009 |
| protein heterodimerization activity | 1.35977617500621 | bayes_pls_golite062009 |
| DNA secondary structure binding | 1.33504054478953 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.32955290929194 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.12641995595394 | bayes_pls_golite062009 |
| protein binding | 1.08760961845332 | bayes_pls_golite062009 |
| protein dimerization activity | 0.966666737816339 | bayes_pls_golite062009 |
| nucleic acid binding | 0.835977072951553 | bayes_pls_golite062009 |
| DNA binding | 0.701080369693496 | bayes_pls_golite062009 |
| catalytic activity | 0.24846317916908 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0698018163897043 | bayes_pls_golite062009 |
|
Region A: Residues: [452-539] |
1 11 21 31 41 51
| | | | | |
1 PDTKGQLEDF DSELIHLKQK LSESLDTRKE LWRKEQKLQT VLETLLSDVN QNQRNVNETM 60
61 SRSLANGIIN VKEITEKLKI SPESVFGT
|
|
Region B: Residues: [563-596] |
1 11 21 31 41 51
| | | | | |
1 FHIVVDTEET ATLIMNELYR MKGGRVTFIP LNRL
|
| Detection Method: | |
| Confidence: | 91.154902 |
| Match: | 1gxlA_ |
| Description: | Smc hinge domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [540-562] |
1 11 21 31 41 51
| | | | | |
1 LGELIKVNDK YKTCAEVIGG NSL
|
|
Region B: Residues: [597-600] |
1 11 21 31 41 51
| | | | | |
1 SLDS
|
|
Region C: Residues: [618-636] |
1 11 21 31 41 51
| | | | | |
1 IKKIKYEPRF EKAVKHVFG
|
| Detection Method: | |
| Confidence: | 91.154902 |
| Match: | 1gxlA_ |
| Description: | Smc hinge domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [601-617] |
1 11 21 31 41 51
| | | | | |
1 DVKFPSNTTT QIQFTPL
|
|
Region B: Residues: [637-663] |
1 11 21 31 41 51
| | | | | |
1 KTIVVKDLGQ GLKLAKKHKL NAITLDG
|
| Detection Method: | |
| Confidence: | 91.154902 |
| Match: | 1gxlA_ |
| Description: | Smc hinge domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [664-730] |
1 11 21 31 41 51
| | | | | |
1 DRADKRGVLT GGYLDQHKRT RLESLKNLNE SRSQHKKILE ELDFVRNELN DIDTKIDQVN 60
61 GNIRKVS
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [731-992] |
1 11 21 31 41 51
| | | | | |
1 NDRESVLTNI EVYRTSLNTK KNEKLILEES LNAIILKLEK LNTNRTFAQE KLNTFENDLL 60
61 QEFDSELSKE EKERLESLTK EISAAHNKLN ITSDALEGIT TTIDSLNAEL ESKLIPQEND 120
121 LESKMSEVGD AFIFGLQDEL KELQLEKESV EKQHENAVLE LGTVQREIES LIAEETNNKK 180
181 LLEKANNQQR LLLKKLDNFQ KSVEKTMIKK TTLVTRREEL QQRIREIGLL PEDALVNDFS 240
241 DITSDQLLQR LNDMNTEISG LK
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [993-1045] |
1 11 21 31 41 51
| | | | | |
1 NVNKRAFENF KKFNERRKDL AERASELDES KDSIQDLIVK LKQQKVNAVD STF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.548 | a.65.1 | Annexin |
| View | Download | 0.705 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.637 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.751 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.645 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.526 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.503 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.493 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.490 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.455 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.446 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.432 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.416 | a.140.3 | Rho termination factor, N-terminal domain |
| View | Download | 0.414 | a.4.1 | Homeodomain-like |
| View | Download | 0.413 | a.30.1 | ROP protein |
| View | Download | 0.413 | a.30.1 | ROP protein |
| View | Download | 0.385 | a.5.2 | UBA-like |
| View | Download | 0.382 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.379 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.377 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.376 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.352 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.347 | d.68.7 | R3H domain |
| View | Download | 0.336 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.336 | a.4.1 | Homeodomain-like |
| View | Download | 0.335 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.334 | a.4.1 | Homeodomain-like |
| View | Download | 0.329 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.320 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.311 | a.65.1 | Annexin |
| View | Download | 0.310 | a.112.1 | Description not found. |
| View | Download | 0.304 | a.4.1 | Homeodomain-like |
| View | Download | 0.303 | a.4.1 | Homeodomain-like |
| View | Download | 0.295 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.291 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.280 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.279 | a.5.2 | UBA-like |
| View | Download | 0.277 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.272 | a.17.1 | p8-MTCP1 |
| View | Download | 0.265 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.265 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.262 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.262 | a.158.1 | F-box domain |
| View | Download | 0.261 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.260 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.255 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.254 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.247 | d.58.49 | YajQ-like |
| View | Download | 0.247 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.240 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.239 | a.43.1 | Met repressor-like |
| View | Download | 0.238 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.234 | a.17.1 | p8-MTCP1 |
| View | Download | 0.233 | a.65.1 | Annexin |
| View | Download | 0.232 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.229 | a.65.1 | Annexin |
| View | Download | 0.229 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.228 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.226 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.223 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.222 | a.2.7 | tRNA-binding arm |
| View | Download | 0.219 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.218 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.217 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.216 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.216 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.214 | a.3.1 | Cytochrome c |
| View | Download | 0.213 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.212 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.211 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.210 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.210 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.209 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.209 | a.161.1 | beta-catenin-interacting protein ICAT |
| View | Download | 0.205 | a.5.2 | UBA-like |
| View | Download | 0.204 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.200 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
|
Region A: Residues: [1046-1230] |
1 11 21 31 41 51
| | | | | |
1 QKVSENFEAV FERLVPRGTA KLIIHRKNDN ANDHDESIDV DMDAESNESQ NGKDSEIMYT 60
61 GVSISVSFNS KQNEQLHVEQ LSGGQKTVCA IALILAIQMV DPASFYLFDE IDAALDKQYR 120
121 TAVATLLKEL SKNAQFICTT FRTDMLQVAD KFFRVKYENK ISTVIEVNRE EAIGFIRGSN 180
181 KFAEV
|
| Detection Method: | |
| Confidence: | 144.94696 |
| Match: | 1e69A_ |
| Description: | Smc head domain |
Matching Structure (courtesy of the PDB): |
|
