Protein: | EHD3 |
Organism: | Saccharomyces cerevisiae |
Length: | 500 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EHD3.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..500] | [1..500] |
|
7.0E-95 | [3..488] | [23..492] |
|
3.0E-84 | [33..420] | [5..369] |
|
7.0E-80 | [1..428] | [17..428] |
|
8.0E-74 | [36..432] | [3..409] |
|
4.0E-73 | [31..446] | [1..412] |
|
2.0E-71 | [31..446] | [1..412] |
|
6.0E-71 | [20..450] | [25..468] |
Region A: Residues: [1-247] |
1 11 21 31 41 51 | | | | | | 1 MLRNTLKCAQ LSSKYGFKTT TRTFMTTQPQ LNVTDAPPVL FTVQDTARVI TLNRPKKLNA 60 61 LNAEMSESMF KTLNEYAKSD TTNLVILKSS NRPRSFCAGG DVATVAIFNF NKEFAKSIKF 120 121 FTDEYSLNFQ IATYLKPIVT FMDGITMGGG VGLSIHTPFR IATENTKWAM PEMDIGFFPD 180 181 VGSTFALPRI VTLANSNSQM ALYLCLTGEV VTGADAYMLG LASHYVSSEN LDALQKRLGE 240 241 ISPPFNN |
Detection Method: | |
Confidence: | 188.201249 |
Match: | 1dubA_ |
Description: | Enoyl-CoA hydratase (crotonase) |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [248-345] |
1 11 21 31 41 51 | | | | | | 1 DPQSAYFFGM VNESIDEFVS PLPKDYVFKY SNEKLNVIEA CFNLSKNGTI EDIMNNLRQY 60 61 EGSAEGKAFA QEIKTKLLTK SPSSLQIALR LVQENSRD |
Detection Method: | |
Confidence: | 188.201249 |
Match: | 1dubA_ |
Description: | Enoyl-CoA hydratase (crotonase) |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [346-433] |
1 11 21 31 41 51 | | | | | | 1 HIESAIKRDL YTAANMCMNQ DSLVEFSEAT KHKLIDKQRV PYPWTKKEQL FVSQLTSITS 60 61 PKPSLPMSLL RNTSNVTWTQ YPYHSKYQ |
Detection Method: | |
Confidence: | 3.30103 |
Match: | 3hdhA_ |
Description: | Short chain L-3-hydroxyacyl CoA dehydrogenase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [434-500] |
1 11 21 31 41 51 | | | | | | 1 LPTEQEIAAY IEKRTNDDTG AKVTEREVLN HFANVIPSRR GKLGIQSLCK IVCERKCEEV 60 61 NDGLRWK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.829 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |