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Protein Overview: HIBC1_ARATH

General Information:
Name(s) found: HIBC1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 378 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to cold [IMP]
    fatty acid beta-oxidation [TAS]
    valine catabolic process [IDA]
    response to auxin stimulus [IMP]
    Molecular Function: 3-hydroxyisobutyryl-CoA hydrolase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK  60
   61 GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV MATYSKAQVS ILNGIVMGGG 120
  121 AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM 180
  181 LACGLATHFV PSTRLTALEA DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR 240
  241 CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL 300
  301 IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED 360
  361 DLKLPPRNNL PALGIAKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..378] PSI-BLAST 48.0 fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native2)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • CoA carboxylase activity
    		•  2.59376553092594 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  2.5107600311009 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  2.49886494691134 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  2.35262768569224 bayes_pls_golite062009
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • dodecenoyl-CoA delta-isomerase activity
    		•  1.06414044115735 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  0.981631877562763 bayes_pls_golite062009
  • ligase activity
    		•  0.393388746635198 bayes_pls_golite062009
  • propionyl-CoA carboxylase activity
    		•  0.2998946244546 bayes_pls_golite062009
  • 3-hydroxybutyryl-CoA epimerase activity
    		•  0.241955774397835 bayes_pls_golite062009
  • binding
    		•  0.106191992778711 bayes_pls_golite062009
  • racemase and epimerase activity, acting on hydroxy acids and derivatives
    		•  0.099208209617217 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle