| Protein: | EHD3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 500 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EHD3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..500] | [1..500] |
|
|
7.0E-95 | [3..488] | [23..492] |
|
|
3.0E-84 | [33..420] | [5..369] |
|
|
7.0E-80 | [1..428] | [17..428] |
|
|
8.0E-74 | [36..432] | [3..409] |
|
|
4.0E-73 | [31..446] | [1..412] |
|
|
2.0E-71 | [31..446] | [1..412] |
|
|
6.0E-71 | [20..450] | [25..468] |
|
Region A: Residues: [1-247] |
1 11 21 31 41 51
| | | | | |
1 MLRNTLKCAQ LSSKYGFKTT TRTFMTTQPQ LNVTDAPPVL FTVQDTARVI TLNRPKKLNA 60
61 LNAEMSESMF KTLNEYAKSD TTNLVILKSS NRPRSFCAGG DVATVAIFNF NKEFAKSIKF 120
121 FTDEYSLNFQ IATYLKPIVT FMDGITMGGG VGLSIHTPFR IATENTKWAM PEMDIGFFPD 180
181 VGSTFALPRI VTLANSNSQM ALYLCLTGEV VTGADAYMLG LASHYVSSEN LDALQKRLGE 240
241 ISPPFNN
|
| Detection Method: |  |
| Confidence: | 188.201249 |
| Match: | 1dubA_ |
| Description: | Enoyl-CoA hydratase (crotonase) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [248-345] |
1 11 21 31 41 51
| | | | | |
1 DPQSAYFFGM VNESIDEFVS PLPKDYVFKY SNEKLNVIEA CFNLSKNGTI EDIMNNLRQY 60
61 EGSAEGKAFA QEIKTKLLTK SPSSLQIALR LVQENSRD
|
| Detection Method: | |
| Confidence: | 188.201249 |
| Match: | 1dubA_ |
| Description: | Enoyl-CoA hydratase (crotonase) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [346-433] |
1 11 21 31 41 51
| | | | | |
1 HIESAIKRDL YTAANMCMNQ DSLVEFSEAT KHKLIDKQRV PYPWTKKEQL FVSQLTSITS 60
61 PKPSLPMSLL RNTSNVTWTQ YPYHSKYQ
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 3hdhA_ |
| Description: | Short chain L-3-hydroxyacyl CoA dehydrogenase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [434-500] |
1 11 21 31 41 51
| | | | | |
1 LPTEQEIAAY IEKRTNDDTG AKVTEREVLN HFANVIPSRR GKLGIQSLCK IVCERKCEEV 60
61 NDGLRWK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.649 | 0.009 | fatty acid beta-oxidation | a.4.1 | Homeodomain-like |
| View | Download | 0.712 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.829 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.749 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.608 | 0.009 | fatty acid beta-oxidation | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.608 | 0.009 | fatty acid beta-oxidation | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.573 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.572 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.568 | 0.009 | fatty acid beta-oxidation | a.46.1 | Methionine synthase domain |
| View | Download | 0.559 | 0.009 | fatty acid beta-oxidation | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.535 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.534 | 0.009 | fatty acid beta-oxidation | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.533 | 0.009 | fatty acid beta-oxidation | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.524 | 0.009 | fatty acid beta-oxidation | a.2.3 | Chaperone J-domain |
| View | Download | 0.523 | 0.009 | fatty acid beta-oxidation | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.522 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.507 | 0.009 | fatty acid beta-oxidation | a.2.3 | Chaperone J-domain |
| View | Download | 0.500 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.497 | 0.009 | fatty acid beta-oxidation | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.494 | 0.009 | fatty acid beta-oxidation | a.4.1 | Homeodomain-like |
| View | Download | 0.487 | 0.009 | fatty acid beta-oxidation | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.467 | 0.009 | fatty acid beta-oxidation | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.465 | 0.009 | fatty acid beta-oxidation | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.465 | 0.009 | fatty acid beta-oxidation | a.4.1 | Homeodomain-like |
| View | Download | 0.460 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.458 | 0.009 | fatty acid beta-oxidation | a.20.1 | PGBD-like |
| View | Download | 0.451 | 0.009 | fatty acid beta-oxidation | a.20.1 | PGBD-like |
| View | Download | 0.450 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.438 | 0.009 | fatty acid beta-oxidation | a.4.1 | Homeodomain-like |
| View | Download | 0.438 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.437 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.435 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.429 | 0.009 | fatty acid beta-oxidation | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.417 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.403 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.400 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.396 | 0.009 | fatty acid beta-oxidation | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.394 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.394 | 0.009 | fatty acid beta-oxidation | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.385 | 0.009 | fatty acid beta-oxidation | a.74.1 | Cyclin-like |
| View | Download | 0.384 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.383 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.380 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.376 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.372 | 0.009 | fatty acid beta-oxidation | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.372 | 0.009 | fatty acid beta-oxidation | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.358 | 0.009 | fatty acid beta-oxidation | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.358 | 0.009 | fatty acid beta-oxidation | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.357 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.352 | 0.009 | fatty acid beta-oxidation | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.352 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.349 | 0.009 | fatty acid beta-oxidation | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.349 | 0.009 | fatty acid beta-oxidation | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.348 | 0.009 | fatty acid beta-oxidation | a.39.1 | EF-hand |
| View | Download | 0.345 | 0.009 | fatty acid beta-oxidation | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.342 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.340 | 0.009 | fatty acid beta-oxidation | a.4.1 | Homeodomain-like |
| View | Download | 0.340 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.329 | 0.009 | fatty acid beta-oxidation | a.3.1 | Cytochrome c |
| View | Download | 0.329 | 0.009 | fatty acid beta-oxidation | a.30.1 | ROP protein |
| View | Download | 0.326 | 0.009 | fatty acid beta-oxidation | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.325 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.319 | 0.009 | fatty acid beta-oxidation | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.316 | 0.009 | fatty acid beta-oxidation | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.311 | 0.009 | fatty acid beta-oxidation | a.112.1 | Description not found. |
| View | Download | 0.310 | 0.009 | fatty acid beta-oxidation | a.118.8 | TPR-like |
| View | Download | 0.307 | 0.009 | fatty acid beta-oxidation | a.46.1 | Methionine synthase domain |
| View | Download | 0.307 | 0.009 | fatty acid beta-oxidation | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.306 | 0.009 | fatty acid beta-oxidation | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.306 | 0.009 | fatty acid beta-oxidation | a.60.1 | SAM/Pointed domain |
| View | Download | 0.302 | 0.009 | fatty acid beta-oxidation | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.301 | 0.009 | fatty acid beta-oxidation | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.300 | 0.009 | fatty acid beta-oxidation | a.3.1 | Cytochrome c |
| View | Download | 0.295 | 0.009 | fatty acid beta-oxidation | d.192.1 | YlxR-like |
| View | Download | 0.294 | 0.009 | fatty acid beta-oxidation | a.46.1 | Methionine synthase domain |
| View | Download | 0.294 | 0.009 | fatty acid beta-oxidation | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.293 | 0.009 | fatty acid beta-oxidation | a.118.9 | ENTH/VHS domain |
| View | Download | 0.290 | 0.009 | fatty acid beta-oxidation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.284 | 0.009 | fatty acid beta-oxidation | a.30.1 | ROP protein |
| View | Download | 0.282 | 0.009 | fatty acid beta-oxidation | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.281 | 0.009 | fatty acid beta-oxidation | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.281 | 0.009 | fatty acid beta-oxidation | a.65.1 | Annexin |
| View | Download | 0.278 | 0.009 | fatty acid beta-oxidation | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.270 | 0.009 | fatty acid beta-oxidation | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.270 | 0.009 | fatty acid beta-oxidation | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.269 | 0.009 | fatty acid beta-oxidation | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.269 | 0.009 | fatty acid beta-oxidation | a.65.1 | Annexin |
| View | Download | 0.269 | 0.009 | fatty acid beta-oxidation | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.267 | 0.009 | fatty acid beta-oxidation | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.266 | 0.009 | fatty acid beta-oxidation | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.265 | 0.009 | fatty acid beta-oxidation | a.112.1 | Description not found. |
| View | Download | 0.264 | 0.009 | fatty acid beta-oxidation | a.101.1 | Uteroglobin-like |
| View | Download | 0.260 | 0.009 | fatty acid beta-oxidation | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.259 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.259 | 0.009 | fatty acid beta-oxidation | a.42.1 | MDM2 |
| View | Download | 0.257 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.254 | 0.009 | fatty acid beta-oxidation | a.28.1 | ACP-like |
| View | Download | 0.253 | 0.009 | fatty acid beta-oxidation | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.252 | 0.009 | fatty acid beta-oxidation | a.28.1 | ACP-like |
| View | Download | 0.252 | 0.009 | fatty acid beta-oxidation | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.250 | 0.009 | fatty acid beta-oxidation | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.249 | 0.009 | fatty acid beta-oxidation | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.249 | 0.009 | fatty acid beta-oxidation | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.247 | 0.009 | fatty acid beta-oxidation | a.77.1 | DEATH domain |
| View | Download | 0.246 | 0.009 | fatty acid beta-oxidation | a.64.1 | Saposin |
| View | Download | 0.244 | 0.009 | fatty acid beta-oxidation | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.243 | 0.009 | fatty acid beta-oxidation | a.126.1 | Serum albumin-like |
| View | Download | 0.242 | 0.009 | fatty acid beta-oxidation | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.237 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.236 | 0.009 | fatty acid beta-oxidation | a.46.1 | Methionine synthase domain |
| View | Download | 0.235 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.233 | 0.009 | fatty acid beta-oxidation | a.112.1 | Description not found. |
| View | Download | 0.233 | 0.009 | fatty acid beta-oxidation | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.233 | 0.009 | fatty acid beta-oxidation | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.230 | 0.009 | fatty acid beta-oxidation | a.112.1 | Description not found. |
| View | Download | 0.230 | 0.009 | fatty acid beta-oxidation | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.229 | 0.009 | fatty acid beta-oxidation | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.229 | 0.009 | fatty acid beta-oxidation | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.227 | 0.009 | fatty acid beta-oxidation | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.227 | 0.009 | fatty acid beta-oxidation | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.226 | 0.009 | fatty acid beta-oxidation | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.225 | 0.009 | fatty acid beta-oxidation | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.224 | 0.009 | fatty acid beta-oxidation | a.2.3 | Chaperone J-domain |
| View | Download | 0.223 | 0.009 | fatty acid beta-oxidation | a.2.3 | Chaperone J-domain |
| View | Download | 0.222 | 0.009 | fatty acid beta-oxidation | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.222 | 0.009 | fatty acid beta-oxidation | a.30.1 | ROP protein |
| View | Download | 0.221 | 0.009 | fatty acid beta-oxidation | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.221 | 0.009 | fatty acid beta-oxidation | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.219 | 0.009 | fatty acid beta-oxidation | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.219 | 0.009 | fatty acid beta-oxidation | a.17.1 | p8-MTCP1 |
| View | Download | 0.218 | 0.009 | fatty acid beta-oxidation | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.218 | 0.009 | fatty acid beta-oxidation | a.21.1 | HMG-box |
| View | Download | 0.216 | 0.009 | fatty acid beta-oxidation | a.118.8 | TPR-like |
| View | Download | 0.216 | 0.009 | fatty acid beta-oxidation | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.213 | 0.009 | fatty acid beta-oxidation | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.210 | 0.009 | fatty acid beta-oxidation | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.205 | 0.009 | fatty acid beta-oxidation | a.30.1 | ROP protein |
| View | Download | 0.204 | 0.009 | fatty acid beta-oxidation | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.203 | 0.009 | fatty acid beta-oxidation | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.202 | 0.009 | fatty acid beta-oxidation | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.201 | 0.009 | fatty acid beta-oxidation | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.201 | 0.009 | fatty acid beta-oxidation | a.65.1 | Annexin |
| View | Download | 0.200 | 0.009 | fatty acid beta-oxidation | a.118.8 | TPR-like |
