Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KAP104.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..912] | [1..876] |
|
0.0 | [7..912] | [1..871] |
|
0.0 | [1..918] | [1..918] |
|
0.0 | [4..916] | [2..879] |
|
0.0 | [4..912] | [2..873] |
|
0.0 | [5..912] | [3..869] |
|
0.0 | [5..883] | [6..869] |
Region A: Residues: [1-96] |
1 11 21 31 41 51 | | | | | | 1 MASTWKPAED YVLQLATLLQ NCMSPNPEIR NNAMEAMENF QLQPEFLNYL CYILIEGESD 60 61 DVLKQHYSLQ DLQNNRATAG MLLKNSMLGG NNLIKS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.440 | d.218.1 | Nucleotidyltransferase |
View | Download | 0.610 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
View | Download | 0.439 | a.60.9 | lambda integrase-like, N-terminal domain |
View | Download | 0.390 | c.78.2 | Aspartate/glutamate racemase |
View | Download | 0.460 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
View | Download | 0.378 | a.74.1 | Cyclin-like |
View | Download | 0.370 | d.56.1 | GroEL-intermediate domain like |
View | Download | 0.351 | a.118.9 | ENTH/VHS domain |
View | Download | 0.332 | d.58.18 | Regulatory domain in the aminoacid metabolism |
View | Download | 0.331 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
View | Download | 0.324 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
View | Download | 0.314 | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.276 | d.58.49 | YajQ-like |
View | Download | 0.272 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
View | Download | 0.271 | a.28.2 | Colicin E immunity proteins |
View | Download | 0.266 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
View | Download | 0.265 | d.16.1 | FAD-linked reductases, C-terminal domain |
View | Download | 0.261 | a.26.1 | 4-helical cytokines |
View | Download | 0.257 | a.24.17 | Group V grass pollen allergen |
View | Download | 0.253 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
View | Download | 0.247 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.242 | d.15.6 | Superantigen toxins, C-terminal domain |
View | Download | 0.240 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
View | Download | 0.240 | a.39.1 | EF-hand |
View | Download | 0.237 | a.74.1 | Cyclin-like |
View | Download | 0.237 | d.45.1 | ClpS-like |
View | Download | 0.235 | a.39.1 | EF-hand |
View | Download | 0.235 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
View | Download | 0.233 | d.52.5 | Probable GTPase Der, C-terminal domain |
View | Download | 0.232 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
View | Download | 0.226 | d.94.1 | HPr-like |
View | Download | 0.224 | a.126.1 | Serum albumin-like |
View | Download | 0.220 | a.11.2 | Second domain of FERM |
View | Download | 0.217 | a.74.1 | Cyclin-like |
View | Download | 0.215 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
View | Download | 0.215 | a.131.1 | Peridinin-chlorophyll protein |
View | Download | 0.211 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
View | Download | 0.211 | d.74.3 | RBP11-like subunits of RNA polymerase |
View | Download | 0.204 | a.24.9 | alpha-catenin/vinculin |
View | Download | 0.204 | d.129.2 | Phosphoglucomutase, C-terminal domain |
View | Download | 0.201 | d.212.1 | TolA/TonB C-terminal domain |
View | Download | 0.200 | c.47.1 | Thioredoxin-like |
Term | Confidence | Notes |
protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
binding | 3.0667965351474 | bayes_pls_golite062009 |
protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
nucleic acid binding | 2.34284977509828 | bayes_pls_golite062009 |
substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
transcription regulator activity | 1.76231475025891 | bayes_pls_golite062009 |
protein binding | 1.73688475473996 | bayes_pls_golite062009 |
DNA binding | 1.62032607987786 | bayes_pls_golite062009 |
nuclear export signal receptor activity | 1.29390474721722 | bayes_pls_golite062009 |
transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
transcription factor activity | 0.923253759652909 | bayes_pls_golite062009 |
structural molecule activity | 0.908029258648777 | bayes_pls_golite062009 |
translation initiation factor activity | 0.83079633551839 | bayes_pls_golite062009 |
translation regulator activity | 0.82193201542158 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 0.803700928110921 | bayes_pls_golite062009 |
molecular transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
signal transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
mRNA binding | 0.46864854653143 | bayes_pls_golite062009 |
RNA binding | 0.40024158562931 | bayes_pls_golite062009 |
clathrin binding | 0.35775052108553 | bayes_pls_golite062009 |
active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
transcription activator activity | 0.0232727461674547 | bayes_pls_golite062009 |
Region A: Residues: [97-688] |
1 11 21 31 41 51 | | | | | | 1 NSHDLGYVKS NIIHGLYNSN NNLVSNVTGI VITTLFSTYY RQHRDDPTGL QMLYQLLELT 60 61 SNGNEPSIKA LSKIMEDSAQ FFQLEWSGNT KPMEALLDSF FRFISNPNFS PVIRSESVKC 120 121 INTVIPLQTQ SFIVRLDKFL EIIFQLAQND ENDLVRAQIC ISFSFLLEFR PDKLVSHLDG 180 181 IVQFMLHLIT TVNEEKVAIE ACEFLHAFAT SPNIPEHILQ PYVKDIVPIL LSKMVYNEES 240 241 IVLLEASNDD DAFLEDKDED IKPIAPRIVK KKEAGNGEDA DDNEDDDDDD DDEDGDVDTQ 300 301 WNLRKCSAAT LDVMTNILPH QVMDIAFPFL REHLGSDRWF IREATILALG AMAEGGMKYF 360 361 NDGLPALIPF LVEQLNDKWA PVRKMTCWTL SRFSPWILQD HTEFLIPVLE PIINTLMDKK 420 421 KDVQEAAISS VAVFIENADS ELVETLFYSQ LLTSFDKCLK YYKKKNLIIL YDAIGRFAEK 480 481 CALDETAMQI ILPPLIEKWA LLSDSDKELW PLLECLSCVA SSLGERFMPM APEVYNRAFR 540 541 ILCHCVELEA KSHQDPTIVV PEKDFIITSL DLIDGLVQGL GAHSQDLLFP QG |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [689-858] |
1 11 21 31 41 51 | | | | | | 1 TKDLTILKIM LECLQDPVHE VRQSCFALLG DIVYFFNSEL VIGNLEDFLK LIGTEIMHND 60 61 DSDGTPAVIN AIWALGLISE RIDLNTYIID MSRIILDLFT TNTQIVDSSV MENLSVTIGK 120 121 MGLTHPEVFS SGAFANDSNW NKWCLSVNAL DDVEEKSSAY MGFLKIINLT |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.799 | 0.990 | nuclear localization sequence binding | a.118.1 | ARM repeat |
View | Download | 0.474 | 0.001 | nuclear localization sequence binding | a.118.8 | TPR-like |
View | Download | 0.451 | 0.001 | nuclear localization sequence binding | a.118.9 | ENTH/VHS domain |
View | Download | 0.390 | N/A | N/A | a.118.9 | ENTH/VHS domain |
View | Download | 0.389 | N/A | N/A | a.118.8 | TPR-like |
View | Download | 0.366 | N/A | N/A | d.211.1 | Ankyrin repeat |
View | Download | 0.330 | N/A | N/A | a.118.8 | TPR-like |
View | Download | 0.314 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
View | Download | 0.305 | N/A | N/A | a.95.1 | Influenza virus matrix protein M1 |
View | Download | 0.301 | N/A | N/A | a.118.8 | TPR-like |
View | Download | 0.268 | N/A | N/A | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
View | Download | 0.266 | N/A | N/A | a.118.9 | ENTH/VHS domain |
View | Download | 0.265 | N/A | N/A | a.89.1 | Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |
View | Download | 0.257 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
View | Download | 0.246 | N/A | N/A | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
View | Download | 0.241 | N/A | N/A | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
View | Download | 0.233 | N/A | N/A | d.162.1 | LDH C-terminal domain-like |
View | Download | 0.227 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
View | Download | 0.220 | N/A | N/A | c.10.1 | RNI-like |
View | Download | 0.218 | N/A | N/A | a.1.1 | Globin-like |
View | Download | 0.210 | N/A | N/A | a.131.1 | Peridinin-chlorophyll protein |
View | Download | 0.209 | N/A | N/A | a.118.9 | ENTH/VHS domain |
View | Download | 0.204 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
Region A: Residues: [859-918] |
1 11 21 31 41 51 | | | | | | 1 STEVTMSNDT IHKIVTGLSS NVEANVFAQE IYTFLMNHSA QISAINFTPD EISFLQQFTS 60 61 |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.626 | a.4.1 | Homeodomain-like |
View | Download | 0.691 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
View | Download | 0.587 | a.4.1 | Homeodomain-like |
View | Download | 0.512 | a.4.1 | Homeodomain-like |
View | Download | 0.502 | a.140.2 | SAP domain |
View | Download | 0.475 | d.68.3 | SirA-like |
View | Download | 0.475 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
View | Download | 0.445 | d.94.1 | HPr-like |
View | Download | 0.437 | a.22.1 | Histone-fold |
View | Download | 0.428 | a.64.1 | Saposin |
View | Download | 0.419 | a.64.1 | Saposin |
View | Download | 0.418 | d.47.1 | Ribosomal protein L11, N-terminal domain |
View | Download | 0.377 | f.14.1 | Voltage-gated potassium channels |
View | Download | 0.367 | a.64.2 | Bacteriocin AS-48 |
View | Download | 0.352 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
View | Download | 0.351 | a.4.1 | Homeodomain-like |
View | Download | 0.346 | a.17.1 | p8-MTCP1 |
View | Download | 0.344 | a.4.1 | Homeodomain-like |
View | Download | 0.335 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
View | Download | 0.330 | a.60.5 | Barrier-to-autointegration factor, BAF |
View | Download | 0.282 | d.15.7 | Immunoglobulin-binding domains |
View | Download | 0.266 | c.55.4 | Translational machinery components |
View | Download | 0.260 | a.28.3 | Retrovirus capsid protein C-terminal domain |
View | Download | 0.252 | d.58.10 | Acylphosphatase-like |
View | Download | 0.247 | d.58.7 | RNA-binding domain, RBD |
View | Download | 0.242 | a.4.1 | Homeodomain-like |
View | Download | 0.234 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
View | Download | 0.227 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
View | Download | 0.226 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
View | Download | 0.222 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
View | Download | 0.214 | a.4.1 | Homeodomain-like |
View | Download | 0.214 | a.4.8 | Ribosomal protein S18 |
View | Download | 0.209 | a.4.5 | "Winged helix" DNA-binding domain |
View | Download | 0.206 | a.28.2 | Colicin E immunity proteins |
View | Download | 0.204 | a.28.1 | ACP-like |