| Protein: | RFC2_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 353 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RFC2_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-84 | [1..353] | [1..353] |
|
|
2.0E-79 | [3..352] | [14..345] |
|
|
3.0E-79 | [2..352] | [11..341] |
|
|
5.0E-78 | [15..352] | [31..351] |
|
|
2.0E-76 | [27..353] | [7..316] |
|
|
2.0E-76 | [18..350] | [21..337] |
|
|
3.0E-76 | [13..350] | [1..321] |
|
|
1.0E-75 | [22..343] | [6..321] |
|
|
1.0E-75 | [23..343] | [7..319] |
|
Region A: Residues: [1-30] |
1 11 21 31 41 51
| | | | | |
1 MFEGFGPNKK RKISKLAAEQ SLAQQPWVEK
|
|
Region B: Residues: [193-262] |
1 11 21 31 41 51
| | | | | |
1 DASNAIDRLR FISEQENVKC DDGVLERILD ISAGDLRRGI TLLQSASKGA QYLGDGKNIT 60
61 STQVEELAGV
|
| Detection Method: |  |
| Confidence: | 679.315398 |
| Match: | 1iqpA_ |
| Description: | Replication factor C |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA clamp loader activity | 6.51495346697904 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 6.40748863504898 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 2.72462789867829 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| mismatched DNA binding | 2.51625633651862 | bayes_pls_golite062009 |
| DNA helicase activity | 2.2817164193758 | bayes_pls_golite062009 |
| nucleic acid binding | 2.21184938313192 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.13284212711072 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.88455339138556 | bayes_pls_golite062009 |
| 1.85506769032946 | bayes_pls_golite062009 | |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| guanine/thymine mispair binding | 1.69026972999845 | bayes_pls_golite062009 |
| DNA insertion or deletion binding | 1.68890613599528 | bayes_pls_golite062009 |
| RNA helicase activity | 1.63960194106079 | bayes_pls_golite062009 |
| DNA replication origin binding | 1.62491387774159 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.61735400124552 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.60404584546501 | bayes_pls_golite062009 |
| microtubule motor activity | 1.35938517416356 | bayes_pls_golite062009 |
| structure-specific DNA binding | 1.2539059700735 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 1.21658213854831 | bayes_pls_golite062009 |
| ribonucleotide binding | 1.21652144153182 | bayes_pls_golite062009 |
| purine nucleotide binding | 1.21571071905795 | bayes_pls_golite062009 |
| nucleotide binding | 1.20347573865566 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| motor activity | 1.14667913749579 | bayes_pls_golite062009 |
| double-stranded DNA binding | 1.117585097627 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| transcription factor activity | 0.697256579145077 | bayes_pls_golite062009 |
| transcription repressor activity | 0.677612020025357 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.656009904481476 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.64416740142962 | bayes_pls_golite062009 |
| GTP binding | 0.643084645864898 | bayes_pls_golite062009 |
| single base insertion or deletion binding | 0.629563765934841 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.568457189190858 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| GTPase activity | 0.406399103964327 | bayes_pls_golite062009 |
| DNA strand annealing activity | 0.283577486331079 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.147579541298736 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.113504049290503 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.111293884322157 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| 3'-5' DNA helicase activity | 0.0769112340058804 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 0.0320943071400439 | bayes_pls_golite062009 |
| double-strand/single-strand DNA junction binding | 0.0136229525922795 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
|
Region A: Residues: [31-192] |
1 11 21 31 41 51
| | | | | |
1 YRPKNLDEVT AQDHAVTVLK KTLKSANLPH MLFYGPPGTG KTSTILALTK ELYGPDLMKS 60
61 RILELNASDE RGISIVREKV KNFARLTVSK PSKHDLENYP CPPYKIIILD EADSMTADAQ 120
121 SALRRTMETY SGVTRFCLIC NYVTRIIDPL ASRCSKFRFK AL
|
|
Region B: Residues: [263-353] |
1 11 21 31 41 51
| | | | | |
1 VPHDILIEIV EKVKSGDFDE IKKYVNTFMK SGWSAASVVN QLHEYYITND NFDTNFKNQI 60
61 SWLLFTTDSR LNNGTNEHIQ LLNLLVKISQ L
|
| Detection Method: | |
| Confidence: | 679.315398 |
| Match: | 1iqpA_ |
| Description: | Replication factor C |
| Matching Structure (courtesy of the PDB): |
|
