| Protein: | AB34G_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1453 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB34G_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
967.0 | [0..1] | [1453..1] |
|
Region A: Residues: [1-447] |
1 11 21 31 41 51
| | | | | |
1 MLGRDEDLVR TMSGRGSLGS TSHRSLAGAA SKSFRDVFAP PTDDVFGRSD RREEDDVELR 60
61 WAALERLPTY DRLRKGMLPQ TMVNGKIGLE DVDVTNLAPK EKKHLMEMIL KFVEEDNEKF 120
121 LRRLRERTDR VGIEVPKIEV RYENLSVEGD VRSASRALPT LFNVTLNTIE SILGLFHLLP 180
181 SKKRKIEILK DISGIIKPSR MTLLLGPPSS GKTTLLQALA GKLDDTLQMS GRITYCGHEF 240
241 REFVPQKTCA YISQHDLHFG EMTVRESLDF SGRCLGVGTR YQLLTELSRR EREAGIKPDP 300
301 EIDAFMKSIA ISGQETSLVT DYVLKLLGLD ICADTLVGDV MRRGISGGQR KRLTTGEMLV 360
361 GPATALFMDE ISTGLDSSTT FQICKFMRQL VHIADVTMVI SLLQPAPETF ELFDDIILLS 420
421 EGQIVYQGSR DNVLEFFEYM GFKCPER
|
| Detection Method: |  |
| Confidence: | 28.69897 |
| Match: | 1yqtA |
| Description: | RNase-L Inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [448-519] |
1 11 21 31 41 51
| | | | | |
1 KGIADFLQEV TSKKDQEQYW NRREHPYSYV SVHDFSSGFN SFHAGQQLAS EFRVPYDKAK 60
61 THPAALVTQK YG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [520-1109] |
1 11 21 31 41 51
| | | | | |
1 ISNKDLFKAC FDREWLLMKR NSFVYVFKTV QITIMSLIAM TVYFRTEMHV GTVQDGQKFY 60
61 GALFFSLINL MFNGMAELAF TVMRLPVFFK QRDFLFYPPW AFALPGFLLK IPLSLIESVI 120
121 WIALTYYTIG FAPSAARFFR QLLAYFCVNQ MALSLFRFLG ALGRTEVIAN SGGTLALLVV 180
181 FVLGGFIISK DDIPSWLTWC YYTSPMMYGQ TALVINEFLD ERWGSPNNDT RINAKTVGEV 240
241 LLKSRGFFTE PYWFWICIGA LLGFTVLFNF CYIIALMYLN PLGNSKATTV VEEGKDKHKG 300
301 SHSGTGGSVV ELTSTSSHGP KKGMVLPFQP LSLAFNNVNY YVDMPAEMKA QGVEGDRLQL 360
361 LRDVGGAFRP GVLTALVGVS GAGKTTLMDV LAGRKTGGYV EGSINISGYP KNQATFARVS 420
421 GYCEQNDIHS PHVTVYESLI YSAWLRLSAD IDTKTREMFV EEVMELVELK PLRNSIVGLP 480
481 GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT VDTGRTVVCT 540
541 IHQPSIDIFE SFDELLLMKR GGQVIYAGTL GHHSQKLVEY FEAIEGVPKI
|
| Detection Method: | |
| Confidence: | 90.221849 |
| Match: | 2hydA |
| Description: | No description for 2hydA was found. |
| Term | Confidence | Notes |
| lipid transporter activity | 7.47642599298853 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 5.57844095962502 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 5.5689620139321 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 5.55992639965745 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 5.50005167063544 | bayes_pls_golite062009 |
| ATPase activity, coupled | 4.98276715440477 | bayes_pls_golite062009 |
| ATPase activity | 4.69795387297193 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 4.45923622153365 | bayes_pls_golite062009 |
| sterol transporter activity | 4.45355165759136 | bayes_pls_golite062009 |
| pyrophosphatase activity | 4.39781350157199 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 4.38133275795019 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.38085303582726 | bayes_pls_golite062009 |
| transporter activity | 3.71239480053329 | bayes_pls_golite062009 |
| hydrolase activity | 3.67426835966263 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 3.57926427233638 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.13960906549884 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.1318898376276 | bayes_pls_golite062009 |
| ATP binding | 3.01346604299372 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.97119034312001 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 2.96271391116269 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 2.91131545957759 | bayes_pls_golite062009 |
| cholesterol transporter activity | 2.72457626066894 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 2.70262534541085 | bayes_pls_golite062009 |
| ribonucleotide binding | 2.70178191749524 | bayes_pls_golite062009 |
| purine nucleotide binding | 2.6583477492092 | bayes_pls_golite062009 |
| nucleotide binding | 2.62374702628143 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 2.61311581579476 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 2.50934147358924 | bayes_pls_golite062009 |
| 2.20174656498665 | bayes_pls_golite062009 | |
| eye pigment precursor transporter activity | 2.19742277986318 | bayes_pls_golite062009 |
| apolipoprotein receptor activity | 2.15656963765495 | bayes_pls_golite062009 |
| syntaxin-13 binding | 2.15656963765495 | bayes_pls_golite062009 |
| apolipoprotein A-I binding | 2.15656963765495 | bayes_pls_golite062009 |
| apolipoprotein A-I receptor activity | 2.15656963765495 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 1.95782378818812 | bayes_pls_golite062009 |
| binding | 1.84115074893083 | bayes_pls_golite062009 |
| fluconazole transporter activity | 1.75428613304237 | bayes_pls_golite062009 |
| azole transporter activity | 1.75428613304237 | bayes_pls_golite062009 |
| protein transporter activity | 1.71214667007262 | bayes_pls_golite062009 |
| nucleic acid binding | 1.62884148289979 | bayes_pls_golite062009 |
| DNA binding | 1.53176391519962 | bayes_pls_golite062009 |
| transcription regulator activity | 1.49517431175162 | bayes_pls_golite062009 |
| signal recognition particle binding | 1.46975774710831 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 1.37783759788533 | bayes_pls_golite062009 |
| glycoprotein transporter activity | 1.30536878174919 | bayes_pls_golite062009 |
| sterol-transporting ATPase activity | 1.30536878174919 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| peptide transporter activity | 1.19353064661766 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.08692822631118 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.977237423302079 | bayes_pls_golite062009 |
| motor activity | 0.87979065815418 | bayes_pls_golite062009 |
| 0.869999622006359 | bayes_pls_golite062009 | |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.755445322666929 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.640772201693186 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.63468044350616 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.62832939629645 | bayes_pls_golite062009 |
| GTP binding | 0.621689261700018 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.557919489256916 | bayes_pls_golite062009 |
| ribonucleoprotein binding | 0.53788302029845 | bayes_pls_golite062009 |
| catalytic activity | 0.368034275052766 | bayes_pls_golite062009 |
| transcription factor activity | 0.344643343870781 | bayes_pls_golite062009 |
| canalicular bile acid transmembrane transporter activity | 0.301752323171649 | bayes_pls_golite062009 |
| molecular transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| signal transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.169034229773346 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.123304946374679 | bayes_pls_golite062009 |
| microtubule motor activity | 0.11674780318211 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.0775601177068852 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.050232896280066 | bayes_pls_golite062009 |
| transcription activator activity | 0.0291047953833683 | bayes_pls_golite062009 |
|
Region A: Residues: [1110-1190] |
1 11 21 31 41 51
| | | | | |
1 KDGYNPATWM LDVTTPSMES QMSVDFAQIF VNSSVNRRNQ ELIKELSTPP PGSNDLYFRT 60
61 KYAQPFSTQT KACFWKMYWS N
|
| Detection Method: | |
| Confidence: | 60.522879 |
| Match: | 1z47A |
| Description: | Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1191-1305] |
1 11 21 31 41 51
| | | | | |
1 WRYPQYNAIR FLMTVVIGVL FGLLFWQTGT KIEKEQDLNN FFGAMYAAVL FLGATNAATV 60
61 QPAVAIERTV FYREKAAGMY SAIPYAISQV AVEIMYNTIQ TGVYTLILYS MIGYD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1306-1453] |
1 11 21 31 41 51
| | | | | |
1 WTVVKFFWFY YYMLTCFVYF TLYGMMLVAL TPNYQIAGIC LSFFLSFWNL FSGFLIPRPQ 60
61 IPIWWRWYYW ASPVAWTLYG IITSQVGDRD SIVHITGVGD MSLKTLLKNG FGFDYDFLPV 120
121 VAVVHIAWIL IFLFAFAYGI KFLNFQRR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
