Protein: | gi|18401002, gi|... |
Organism: | Arabidopsis thaliana |
Length: | 684 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18401002, gi|....
Description | E-value | Query Range |
Subject Range |
|
424.0 | [0..1] | [683..1] |
Region A: Residues: [1-107] |
1 11 21 31 41 51 | | | | | | 1 MSGRQRSVAA AVHHQRQLSD NPLDMSSSNG RWLQSTGLQH FQSSANDYGY YAGGQGGGGQ 60 61 AARGYQNAQR GNEFFGEPTT PQYGARPTNQ RKNNDESEFS PGLLDLH |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [108-492] |
1 11 21 31 41 51 | | | | | | 1 SFDTELLPEI PVSNQLDGPS LFNPSQGQSF DDFEAYNKQP NRSRVLAENL AAEKERMNAV 60 61 AKIKVVVRKR PLNKKESTKN EEDIVDTHAN CLTVHETKLK VDLTAYVEKH EFVFDAVLDE 120 121 EVSNDEVYRE TVEPVVPLIF QRIKATCFAY GQTGSGKTYT MKPLPLKASR DILRLMHHTY 180 181 RNQGFQLFVS FFEIYGGKLY DLLSERKKLC MREDGKQQVC IVGLQEYRVS DTDAIMELIE 240 241 RGSATRSTGT TGANEESSRS HAILQLAIKK SVEGNQSKPP RLVGKLSFID LAGSERGADT 300 301 TDNDKQTRLE GAEINKSLLA LKECIRALDN DQGHIPFRGS KLTEVLRDSF MGNSRTVMIS 360 361 CISPSSGSCE HTLNTLRYAD RVKSL |
Detection Method: | |
Confidence: | 81.0 |
Match: | 1v8jA |
Description: | The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-ADP |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
microtubule motor activity | 7.68336791348661 | bayes_pls_golite062009 |
plus-end-directed microtubule motor activity | 4.97507344344589 | bayes_pls_golite062009 |
microfilament motor activity | 4.176620576177 | bayes_pls_golite062009 |
motor activity | 4.04927796049806 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
actin-dependent ATPase activity | 2.77140616759165 | bayes_pls_golite062009 |
microtubule plus-end binding | 2.71138928021716 | bayes_pls_golite062009 |
tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
binding | 2.64537357529343 | bayes_pls_golite062009 |
microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
transporter activity | 2.58140740499725 | bayes_pls_golite062009 |
cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
transmembrane transporter activity | 2.39695871109024 | bayes_pls_golite062009 |
ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
ATPase activity, coupled | 2.18396165590908 | bayes_pls_golite062009 |
ATP-dependent DNA helicase activity | 2.07967285635739 | bayes_pls_golite062009 |
actin binding | 1.75397031486306 | bayes_pls_golite062009 |
hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
general RNA polymerase II transcription factor activity | 1.40384549325664 | bayes_pls_golite062009 |
helicase activity | 1.33212695797068 | bayes_pls_golite062009 |
substrate-specific transporter activity | 1.29730375126024 | bayes_pls_golite062009 |
protein binding | 1.22129154759482 | bayes_pls_golite062009 |
DNA-dependent ATPase activity | 1.07479235523606 | bayes_pls_golite062009 |
purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 0.906554174337376 | bayes_pls_golite062009 |
nucleic acid binding | 0.777787753097919 | bayes_pls_golite062009 |
actin filament binding | 0.728264616959762 | bayes_pls_golite062009 |
structure-specific DNA binding | 0.579644950922817 | bayes_pls_golite062009 |
kinetochore binding | 0.505370954958131 | bayes_pls_golite062009 |
DNA binding | 0.479412476059825 | bayes_pls_golite062009 |
GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
guanyl nucleotide binding | 0.399434758448606 | bayes_pls_golite062009 |
GTP binding | 0.398333597279278 | bayes_pls_golite062009 |
guanyl ribonucleotide binding | 0.39332178627529 | bayes_pls_golite062009 |
adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 0.355466224802969 | bayes_pls_golite062009 |
RNA helicase activity | 0.34746349346164 | bayes_pls_golite062009 |
histone acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
lysine N-acetyltransferase activity | 0.328186246219424 | bayes_pls_golite062009 |
transcription regulator activity | 0.312171320541728 | bayes_pls_golite062009 |
ATP-dependent RNA helicase activity | 0.30832907234141 | bayes_pls_golite062009 |
RNA-dependent ATPase activity | 0.29532978396745 | bayes_pls_golite062009 |
primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
ATP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
purine NTP-dependent helicase activity | 0.25143870859482 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
protein transporter activity | 0.178442534411253 | bayes_pls_golite062009 |
DNA helicase activity | 0.17029946873911 | bayes_pls_golite062009 |
mismatched DNA binding | 0.13866566261611 | bayes_pls_golite062009 |
minus-end-directed microtubule motor activity | 0.068779631341469 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 0.0254369227200564 | bayes_pls_golite062009 |
structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
Region A: Residues: [493-684] |
1 11 21 31 41 51 | | | | | | 1 SKGNASKKDV SSSTMNLRES TKIPLSSALP TPSNFDDDVN EMWTEENDEF DASDYEQDKQ 60 61 MWKKNGKLEP SYNGMAQERI PKPTIQMKSR DMPRPDMKKS NSDDNLNALL QEEEDLVNAH 120 121 RKQVEDTMNI VKEEMNLLVE ADQPGNQLDG YISRLNTILS QKAAGILQLQ NRLAHFQKRL 180 181 REHNVLVSTT GY |
Detection Method: | |
Confidence: | 9.221849 |
Match: | 1i84S |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |