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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Gip2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein phosphatase type 1 complex 1.5882E-5 6 7 2 6292
protein serine/threonine phosphatase complex 1.0242E-4 6 17 2 6292
mating projection base 6.6592E-3 6 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glycogen metabolic process 1.4673E-11 6 32 5 6292
energy reserve metabolic process 1.4673E-11 6 32 5 6292
glucan metabolic process 7.0038E-11 6 43 5 6292
cellular glucan metabolic process 7.0038E-11 6 43 5 6292
energy derivation by oxidation of organic compounds 1.5964E-10 6 149 6 6292
cellular polysaccharide metabolic process 2.5271E-10 6 55 5 6292
polysaccharide metabolic process 3.9647E-10 6 60 5 6292
generation of precursor metabolites and energy 8.2184E-10 6 195 6 6292
glucose metabolic process 8.4256E-9 6 109 5 6292
hexose metabolic process 1.6205E-8 6 124 5 6292
monosaccharide metabolic process 2.4916E-8 6 135 5 6292
alcohol metabolic process 2.9146E-7 6 220 5 6292
cellular carbohydrate metabolic process 6.9933E-7 6 262 5 6292
carbohydrate metabolic process 9.9244E-7 6 281 5 6292
small molecule metabolic process 3.0521E-6 6 760 6 6292
glycogen catabolic process 1.5882E-5 6 7 2 6292
glucan catabolic process 2.1167E-5 6 8 2 6292
cellular polysaccharide catabolic process 2.7204E-5 6 9 2 6292
polysaccharide catabolic process 4.1526E-5 6 11 2 6292
protein amino acid dephosphorylation 2.8334E-4 6 28 2 6292
dephosphorylation 5.817E-4 6 40 2 6292
cellular carbohydrate catabolic process 1.8804E-3 6 72 2 6292
histone dephosphorylation 1.9064E-3 6 2 1 6292
carbohydrate catabolic process 2.0389E-3 6 75 2 6292
malate metabolic process 3.8098E-3 6 4 1 6292
catabolic process 8.1296E-3 6 496 3 6292
cell morphogenesis during vegetative growth 8.5551E-3 6 9 1 6292
termination of RNA polymerase II transcription, poly(A)-independent 8.5551E-3 6 9 1 6292
termination of RNA polymerase II transcription, poly(A)-coupled 9.5019E-3 6 10 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

transferase activity, transferring hexosyl groups 3.8518E-5 6 80 3 6292
transferase activity, transferring glycosyl groups 8.4638E-5 6 104 3 6292
glycogen phosphorylase activity 9.5359E-4 6 1 1 6292
glycogen debranching enzyme activity 9.5359E-4 6 1 1 6292
amylo-alpha-1,6-glucosidase activity 9.5359E-4 6 1 1 6292
4-alpha-glucanotransferase activity 9.5359E-4 6 1 1 6292
phosphorylase activity 9.5359E-4 6 1 1 6292
glycogen (starch) synthase activity 1.9064E-3 6 2 1 6292
L-malate dehydrogenase activity 3.8098E-3 6 4 1 6292
malate dehydrogenase activity 4.7604E-3 6 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle