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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Xrs2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

Mre11 complex 4.5469E-7 3 3 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

double-strand break repair via break-induced replication 5.4528E-6 3 9 2 6292
meiotic DNA double-strand break formation 8.329E-6 3 11 2 6292
double-strand break repair via homologous recombination 3.4941E-5 3 22 2 6292
double-strand break repair via nonhomologous end joining 4.5363E-5 3 25 2 6292
recombinational repair 4.9138E-5 3 26 2 6292
non-recombinational repair 8.4748E-5 3 34 2 6292
nucleic acid phosphodiester bond hydrolysis 1.5615E-4 3 46 2 6292
double-strand break repair 2.4051E-4 3 57 2 6292
meiosis I 4.6321E-4 3 79 2 6292
DNA recombination 9.6474E-4 3 114 2 6292
meiotic DNA double-strand break processing 1.4299E-3 3 3 1 6292
M phase of meiotic cell cycle 1.8958E-3 3 160 2 6292
meiosis 1.8958E-3 3 160 2 6292
meiotic cell cycle 1.9912E-3 3 164 2 6292
DNA catabolic process, exonucleolytic 2.3825E-3 3 5 1 6292
DNA double-strand break processing 2.3825E-3 3 5 1 6292
DNA repair 2.7234E-3 3 192 2 6292
response to DNA damage stimulus 4.0991E-3 3 236 2 6292
anatomical structure homeostasis 5.9917E-3 3 286 2 6292
telomere organization 5.9917E-3 3 286 2 6292
telomere maintenance 5.9917E-3 3 286 2 6292
cellular response to stress 6.1581E-3 3 290 2 6292
M phase 6.3267E-3 3 294 2 6292
DNA catabolic process 7.136E-3 3 15 1 6292
telomere maintenance via recombination 7.6106E-3 3 16 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

telomeric DNA binding 9.9937E-6 3 12 2 6292
sequence-specific DNA binding 1.8474E-4 3 50 2 6292
adenylate kinase activity 1.9063E-3 3 4 1 6292
nucleotide kinase activity 2.8585E-3 3 6 1 6292
DNA binding 4.8144E-3 3 256 2 6292
phosphotransferase activity, phosphate group as acceptor 5.2364E-3 3 11 1 6292
nucleobase, nucleoside, nucleotide kinase activity 5.7116E-3 3 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle