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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Ctf13. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

CBF3 complex 9.0929E-7 3 4 2 6292
kinetochore 2.6665E-4 3 60 2 6292
chromosome, centromeric region 3.3284E-4 3 67 2 6292
RAVE complex 1.4299E-3 3 3 1 6292
chromosomal part 4.1335E-3 3 237 2 6292
SCF ubiquitin ligase complex 5.2364E-3 3 11 1 6292
chromosome 5.5058E-3 3 274 2 6292
cullin-RING ubiquitin ligase complex 6.6614E-3 3 14 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

centromere complex assembly 4.5469E-7 3 3 2 6292
kinetochore assembly 4.5469E-7 3 3 2 6292
kinetochore organization 4.5469E-7 3 3 2 6292
protein-DNA complex assembly 1.1188E-4 3 39 2 6292
cellular protein complex assembly 2.1572E-4 3 54 2 6292
organelle assembly 3.5308E-4 3 69 2 6292
chromosome organization 6.8292E-4 3 555 3 6292
protein complex biogenesis 1.7798E-3 3 155 2 6292
protein complex assembly 1.7798E-3 3 155 2 6292
cellular macromolecular complex assembly 2.449E-3 3 182 2 6292
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 3.3344E-3 3 7 1 6292
protein neddylation 3.3344E-3 3 7 1 6292
cellular macromolecular complex subunit organization 4.9265E-3 3 259 2 6292
protein ubiquitination during ubiquitin-dependent protein catabolic process 5.2364E-3 3 11 1 6292
regulation of protein complex assembly 5.2364E-3 3 11 1 6292
organelle organization 5.734E-3 3 1127 3 6292
macromolecular complex assembly 5.7868E-3 3 281 2 6292
regulation of cellular component biogenesis 8.5592E-3 3 18 1 6292
macromolecular complex subunit organization 9.2699E-3 3 357 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sequence-specific DNA binding 1.8474E-4 3 50 2 6292
centromeric DNA binding 3.8101E-3 3 8 1 6292
DNA binding 4.8144E-3 3 256 2 6292
DNA bending activity 6.1865E-3 3 13 1 6292
DNA replication origin binding 6.1865E-3 3 13 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle