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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

extrinsic to vacuolar membrane 1.2712E-3 4 2 1 6292
HOPS complex 3.8098E-3 4 6 1 6292
extrinsic to organelle membrane 7.6087E-3 4 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glutamine family amino acid biosynthetic process 1.1396E-4 4 28 2 6292
glutamine family amino acid metabolic process 2.7138E-4 4 43 2 6292
mitochondrion degradation 1.2712E-3 4 2 1 6292
proline biosynthetic process 1.9063E-3 4 3 1 6292
cellular amino acid biosynthetic process 1.9066E-3 4 114 2 6292
amine biosynthetic process 2.1811E-3 4 122 2 6292
macroautophagy 2.5411E-3 4 4 1 6292
glyoxylate cycle 2.5411E-3 4 4 1 6292
citrate metabolic process 2.5411E-3 4 4 1 6292
organic acid biosynthetic process 2.8239E-3 4 139 2 6292
carboxylic acid biosynthetic process 2.8239E-3 4 139 2 6292
glyoxylate metabolic process 3.1756E-3 4 5 1 6292
proline metabolic process 4.4437E-3 4 7 1 6292
cellular amino acid metabolic process 5.7261E-3 4 199 2 6292
Golgi to endosome transport 6.9763E-3 4 11 1 6292
cellular amine metabolic process 7.0945E-3 4 222 2 6292
vesicle docking during exocytosis 7.6087E-3 4 12 1 6292
glutamate biosynthetic process 8.2408E-3 4 13 1 6292
amine metabolic process 8.465E-3 4 243 2 6292
cellular amino acid and derivative metabolic process 8.465E-3 4 243 2 6292
cellular nitrogen compound biosynthetic process 8.739E-3 4 247 2 6292
membrane docking 8.8726E-3 4 14 1 6292
vesicle docking 8.8726E-3 4 14 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glutamate-5-semialdehyde dehydrogenase activity 6.3573E-4 4 1 1 6292
citrate (Si)-synthase activity 1.9063E-3 4 3 1 6292
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 6.3436E-3 4 10 1 6292

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