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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

spliceosomal complex 3.3854E-6 5 45 3 6292
ribonucleoprotein complex 4.783E-3 5 514 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

RNA splicing, via transesterification reactions 1.2957E-9 5 107 5 6292
RNA splicing 3.7699E-9 5 132 5 6292
nuclear mRNA splicing, via spliceosome 2.8501E-7 5 99 4 6292
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2.9684E-7 5 100 4 6292
RNA processing 7.8377E-7 5 380 5 6292
mRNA processing 1.7841E-6 5 156 4 6292
mRNA metabolic process 6.2193E-6 5 213 4 6292
RNA metabolic process 7.942E-5 5 954 5 6292
gene expression 3.5034E-4 5 1283 5 6292
nucleic acid metabolic process 5.7208E-4 5 1415 5 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 9.5045E-4 5 1566 5 6292
cellular nitrogen compound metabolic process 1.7545E-3 5 1770 5 6292
nitrogen compound metabolic process 1.8612E-3 5 1791 5 6292
RNA splicing, via transesterification reactions with guanosine as nucleophile 5.552E-3 5 7 1 6292
Group I intron splicing 5.552E-3 5 7 1 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

first spliceosomal transesterification activity 4.7604E-3 5 6 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle