| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 6 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| HOPS complex | 4.3871E-16 | 6 | 6 | 5 | 6292 |
| vacuolar membrane | 1.0118E-8 | 6 | 113 | 5 | 6292 |
| vacuolar part | 1.4314E-8 | 6 | 121 | 5 | 6292 |
| fungal-type vacuole | 5.5149E-8 | 6 | 158 | 5 | 6292 |
| lytic vacuole | 5.5149E-8 | 6 | 158 | 5 | 6292 |
| storage vacuole | 5.5149E-8 | 6 | 158 | 5 | 6292 |
| vacuole | 2.2532E-7 | 6 | 209 | 5 | 6292 |
| fungal-type vacuole membrane | 2.5985E-7 | 6 | 74 | 4 | 6292 |
| membrane part | 6.967E-5 | 6 | 662 | 5 | 6292 |
| organelle membrane | 8.6631E-5 | 6 | 692 | 5 | 6292 |
| protein complex | 9.756E-4 | 6 | 1137 | 5 | 6292 |
| membrane | 1.2554E-3 | 6 | 1198 | 5 | 6292 |
| extrinsic to vacuolar membrane | 1.9064E-3 | 6 | 2 | 1 | 6292 |
| macromolecular complex | 5.5477E-3 | 6 | 1635 | 5 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| late endosome to vacuole transport | 3.1004E-12 | 6 | 24 | 5 | 6292 |
| vacuole fusion, non-autophagic | 5.8863E-12 | 6 | 27 | 5 | 6292 |
| Golgi to endosome transport | 7.5736E-11 | 6 | 11 | 4 | 6292 |
| vacuole organization | 9.9695E-11 | 6 | 46 | 5 | 6292 |
| endosome transport | 1.8887E-10 | 6 | 52 | 5 | 6292 |
| membrane fusion | 7.0043E-10 | 6 | 67 | 5 | 6292 |
| cellular membrane fusion | 7.0043E-10 | 6 | 67 | 5 | 6292 |
| vacuolar transport | 1.106E-8 | 6 | 115 | 5 | 6292 |
| cellular membrane organization | 1.7174E-7 | 6 | 198 | 5 | 6292 |
| membrane organization | 1.7174E-7 | 6 | 198 | 5 | 6292 |
| post-Golgi vesicle-mediated transport | 1.842E-7 | 6 | 68 | 4 | 6292 |
| vesicle-mediated transport | 2.5688E-6 | 6 | 340 | 5 | 6292 |
| Golgi vesicle transport | 7.0577E-6 | 6 | 168 | 4 | 6292 |
| transport | 1.5629E-5 | 6 | 997 | 6 | 6292 |
| establishment of localization | 1.6695E-5 | 6 | 1008 | 6 | 6292 |
| localization | 2.2593E-5 | 6 | 1060 | 6 | 6292 |
| intracellular transport | 2.8701E-5 | 6 | 553 | 5 | 6292 |
| establishment of localization in cell | 4.2574E-5 | 6 | 599 | 5 | 6292 |
| vesicle docking during exocytosis | 4.981E-5 | 6 | 12 | 2 | 6292 |
| cellular localization | 6.0368E-5 | 6 | 643 | 5 | 6292 |
| membrane docking | 6.8619E-5 | 6 | 14 | 2 | 6292 |
| vesicle docking | 6.8619E-5 | 6 | 14 | 2 | 6292 |
| exocytosis | 7.6991E-4 | 6 | 46 | 2 | 6292 |
| organelle organization | 9.3483E-4 | 6 | 1127 | 5 | 6292 |
| secretion | 1.0609E-3 | 6 | 54 | 2 | 6292 |
| secretion by cell | 1.0609E-3 | 6 | 54 | 2 | 6292 |
| cellular component organization | 4.7462E-3 | 6 | 1582 | 5 | 6292 |
| vacuolar protein processing | 4.7604E-3 | 6 | 5 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Rab guanyl-nucleotide exchange factor activity | 5.7102E-3 | 6 | 6 | 1 | 6292 |