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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 11 proteins

Complex Member Proteins

Protein

GO Cellular Component GO Biological Process GO Molecular Function
PRE1
  • nucleus
  • proteasome core complex, beta-subunit complex
  • ascospore formation
  • response to stress
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PRE10
  • proteasome core complex, alpha-subunit complex
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PRE3
  • proteasome core complex, beta-subunit complex
  • ascospore formation
  • response to stress
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PRE5
  • proteasome core complex, alpha-subunit complex
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PRE6
  • mitochondrion
  • proteasome core complex, alpha-subunit complex
  • cytosol
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PRE8
  • proteasome core complex, alpha-subunit complex
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PRE9
  • proteasome core complex, alpha-subunit complex
  • filamentous growth
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PUP2
  • proteasome core complex, alpha-subunit complex
  • ascospore formation
  • response to stress
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • PUP3
  • proteasome core complex, beta-subunit complex
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • SCL1
  • mitochondrion
  • proteasome core complex, alpha-subunit complex
  • ubiquitin-dependent protein catabolic process
  • endopeptidase activity
  • URH1
  • nucleus
  • cytoplasm
  • pyrimidine nucleoside catabolic process
  • ER-associated protein catabolic process
  • pyrimidine salvage
  • ribosylpyrimidine nucleosidase activity
  • Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    proteasome core complex 3.3077E-27 11 16 10 6292
    proteasome complex 2.6891E-21 11 48 10 6292
    proteasome core complex, alpha-subunit complex 4.2744E-21 11 7 7 6292
    proteasome core complex, beta-subunit complex 1.3864E-7 11 7 3 6292
    protein complex 3.3087E-7 11 1137 10 6292
    macromolecular complex 1.1571E-5 11 1635 10 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    modification-dependent protein catabolic process 1.5305E-18 11 156 11 6292
    ubiquitin-dependent protein catabolic process 1.5305E-18 11 156 11 6292
    proteolysis involved in cellular protein catabolic process 1.9004E-18 11 159 11 6292
    modification-dependent macromolecule catabolic process 2.7011E-18 11 164 11 6292
    cellular protein catabolic process 4.3395E-18 11 171 11 6292
    proteolysis 1.2687E-17 11 188 11 6292
    protein catabolic process 1.3471E-17 11 189 11 6292
    cellular macromolecule catabolic process 6.0461E-16 11 265 11 6292
    macromolecule catabolic process 1.9351E-15 11 294 11 6292
    cellular catabolic process 9.0699E-14 11 415 11 6292
    catabolic process 6.5905E-13 11 496 11 6292
    cellular protein metabolic process 3.4344E-9 11 1074 11 6292
    protein metabolic process 6.3855E-9 11 1136 11 6292
    cellular macromolecule metabolic process 1.4269E-5 11 2285 11 6292
    macromolecule metabolic process 1.9349E-5 11 2349 11 6292
    primary metabolic process 1.9438E-4 11 2896 11 6292
    cellular metabolic process 3.2347E-4 11 3033 11 6292
    metabolic process 5.03E-4 11 3157 11 6292
    sexual sporulation 8.1643E-4 11 112 3 6292
    sexual sporulation resulting in formation of a cellular spore 8.1643E-4 11 112 3 6292
    cell development 8.1643E-4 11 112 3 6292
    ascospore formation 8.1643E-4 11 112 3 6292
    sporulation 1.1241E-3 11 125 3 6292
    sporulation resulting in formation of a cellular spore 1.1241E-3 11 125 3 6292
    anatomical structure formation involved in morphogenesis 1.2317E-3 11 129 3 6292
    reproductive process in single-celled organism 1.3751E-3 11 134 3 6292
    cell differentiation 1.8318E-3 11 148 3 6292
    reproductive developmental process 1.9406E-3 11 151 3 6292
    reproductive cellular process 5.0257E-3 11 211 3 6292
    reproductive process 5.0929E-3 11 212 3 6292
    pyrimidine nucleoside catabolic process 5.2364E-3 11 3 1 6292
    reproduction of a single-celled organism 5.4373E-3 11 217 3 6292
    sexual reproduction 6.6338E-3 11 233 3 6292
    anatomical structure morphogenesis 8.7081E-3 11 257 3 6292
    nucleoside catabolic process 8.7135E-3 11 5 1 6292
    anatomical structure development 8.9917E-3 11 260 3 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    P-value

    A

    B

    I

    T

    endopeptidase activity 9.8301E-21 11 54 10 6292
    peptidase activity, acting on L-amino acid peptides 4.126E-18 11 95 10 6292
    peptidase activity 5.9501E-15 11 192 10 6292
    hydrolase activity 5.5655E-10 11 911 11 6292
    catalytic activity 7.2915E-6 11 2150 11 6292
    ribosylpyrimidine nucleosidase activity 3.4937E-3 11 2 1 6292

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle