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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 9 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proteasome core complex 1.9075E-21 9 16 8 6292
proteasome core complex, alpha-subunit complex 6.8365E-18 9 7 6 6292
proteasome complex 5.5676E-17 9 48 8 6292
protein complex 8.4269E-6 9 1137 8 6292
proteasome core complex, beta-subunit complex 3.8057E-5 9 7 2 6292
macromolecular complex 1.4222E-4 9 1635 8 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

modification-dependent protein catabolic process 1.053E-12 9 156 8 6292
ubiquitin-dependent protein catabolic process 1.053E-12 9 156 8 6292
proteolysis involved in cellular protein catabolic process 1.2301E-12 9 159 8 6292
modification-dependent macromolecule catabolic process 1.5835E-12 9 164 8 6292
cellular protein catabolic process 2.226E-12 9 171 8 6292
proteolysis 4.8125E-12 9 188 8 6292
protein catabolic process 5.0244E-12 9 189 8 6292
cellular macromolecule catabolic process 7.7522E-11 9 265 8 6292
macromolecule catabolic process 1.7906E-10 9 294 8 6292
cellular catabolic process 2.8511E-9 9 415 8 6292
catabolic process 1.1858E-8 9 496 8 6292
cellular protein metabolic process 5.3897E-6 9 1074 8 6292
protein metabolic process 8.369E-6 9 1136 8 6292
primary metabolic process 9.2081E-4 9 2896 9 6292
cellular metabolic process 1.3966E-3 9 3033 9 6292
cellular macromolecule metabolic process 1.8315E-3 9 2285 8 6292
metabolic process 2.004E-3 9 3157 9 6292
macromolecule metabolic process 2.2547E-3 9 2349 8 6292
UDP-N-acetylglucosamine metabolic process 2.859E-3 9 2 1 6292
UDP-N-acetylglucosamine biosynthetic process 2.859E-3 9 2 1 6292
glucosamine biosynthetic process 4.2857E-3 9 3 1 6292
amino sugar metabolic process 4.2857E-3 9 3 1 6292
glucosamine metabolic process 4.2857E-3 9 3 1 6292
N-acetylglucosamine metabolic process 4.2857E-3 9 3 1 6292
N-acetylglucosamine biosynthetic process 4.2857E-3 9 3 1 6292
amino sugar biosynthetic process 4.2857E-3 9 3 1 6292
nucleotide-sugar metabolic process 9.9746E-3 9 7 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endopeptidase activity 1.5338E-16 9 54 8 6292
peptidase activity, acting on L-amino acid peptides 1.7814E-14 9 95 8 6292
peptidase activity 5.7101E-12 9 192 8 6292
hydrolase activity 1.4767E-6 9 911 8 6292
catalytic activity 6.2813E-5 9 2150 9 6292
glucosamine 6-phosphate N-acetyltransferase activity 1.4304E-3 9 1 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle