| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 6 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| non-membrane-bounded organelle | 1.2371E-5 | 6 | 959 | 6 | 6292 |
| intracellular non-membrane-bounded organelle | 1.2371E-5 | 6 | 959 | 6 | 6292 |
| nucleolus | 1.7494E-5 | 6 | 211 | 4 | 6292 |
| nuclear outer membrane | 4.7876E-5 | 6 | 86 | 3 | 6292 |
| nuclear membrane | 6.87E-5 | 6 | 97 | 3 | 6292 |
| nuclear lumen | 3.5395E-4 | 6 | 453 | 4 | 6292 |
| outer membrane | 4.1815E-4 | 6 | 178 | 3 | 6292 |
| organelle outer membrane | 4.1815E-4 | 6 | 178 | 3 | 6292 |
| preribosome | 4.1945E-4 | 6 | 34 | 2 | 6292 |
| nuclear envelope | 5.8088E-4 | 6 | 199 | 3 | 6292 |
| nuclear membrane-endoplasmic reticulum network | 9.1135E-4 | 6 | 232 | 3 | 6292 |
| organelle lumen | 1.5136E-3 | 6 | 660 | 4 | 6292 |
| intracellular organelle lumen | 1.5136E-3 | 6 | 660 | 4 | 6292 |
| membrane-enclosed lumen | 1.8952E-3 | 6 | 700 | 4 | 6292 |
| endomembrane system | 4.3509E-3 | 6 | 398 | 3 | 6292 |
| preribosome, small subunit precursor | 5.7102E-3 | 6 | 6 | 1 | 6292 |
| envelope | 8.5521E-3 | 6 | 505 | 3 | 6292 |
| organelle envelope | 8.5521E-3 | 6 | 505 | 3 | 6292 |
| ribonucleoprotein complex | 8.9879E-3 | 6 | 514 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| rRNA processing | 1.9032E-8 | 6 | 128 | 5 | 6292 |
| rRNA metabolic process | 2.684E-8 | 6 | 137 | 5 | 6292 |
| ncRNA processing | 2.5971E-7 | 6 | 215 | 5 | 6292 |
| ncRNA metabolic process | 6.3506E-7 | 6 | 257 | 5 | 6292 |
| ribosome biogenesis | 2.8028E-6 | 6 | 346 | 5 | 6292 |
| ribonucleoprotein complex biogenesis | 4.1287E-6 | 6 | 374 | 5 | 6292 |
| RNA processing | 4.4689E-6 | 6 | 380 | 5 | 6292 |
| gene expression | 7.1216E-5 | 6 | 1283 | 6 | 6292 |
| cellular component biogenesis | 8.7868E-5 | 6 | 694 | 5 | 6292 |
| RNA metabolic process | 4.1658E-4 | 6 | 954 | 5 | 6292 |
| cellular macromolecule metabolic process | 2.2844E-3 | 6 | 2285 | 6 | 6292 |
| macromolecule metabolic process | 2.6967E-3 | 6 | 2349 | 6 | 6292 |
| nucleic acid metabolic process | 2.791E-3 | 6 | 1415 | 5 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 4.5228E-3 | 6 | 1566 | 5 | 6292 |
| cellular nitrogen compound metabolic process | 8.0643E-3 | 6 | 1770 | 5 | 6292 |
| nitrogen compound metabolic process | 8.5237E-3 | 6 | 1791 | 5 | 6292 |
| primary metabolic process | 9.4808E-3 | 6 | 2896 | 6 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| rRNA (adenine) methyltransferase activity | 9.5359E-4 | 6 | 1 | 1 | 6292 |
| rRNA methyltransferase activity | 4.7604E-3 | 6 | 5 | 1 | 6292 |
| ribonucleoprotein binding | 6.6592E-3 | 6 | 7 | 1 | 6292 |