YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

plasma membrane enriched fraction 6.3573E-4 4 1 1 6292
eukaryotic translation initiation factor 4F complex 2.5411E-3 4 4 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of translation 4.7822E-4 4 57 2 6292
posttranscriptional regulation of gene expression 5.4787E-4 4 61 2 6292
positive regulation of translational elongation 6.3573E-4 4 1 1 6292
regulation of cellular protein metabolic process 6.8098E-4 4 68 2 6292
regulation of protein metabolic process 8.0639E-4 4 74 2 6292
positive regulation of translation 2.5411E-3 4 4 1 6292
proteasome assembly 3.8098E-3 4 6 1 6292
positive regulation of cellular protein metabolic process 4.4437E-3 4 7 1 6292
positive regulation of protein metabolic process 5.0773E-3 4 8 1 6292
'de novo' protein folding 5.7106E-3 4 9 1 6292
protein refolding 6.3436E-3 4 10 1 6292
regulation of translational initiation 6.9763E-3 4 11 1 6292
regulation of translational elongation 8.2408E-3 4 13 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleotide binding 2.4654E-4 4 41 2 6292
purine ribonucleotide binding 2.4654E-4 4 41 2 6292
translation factor activity, nucleic acid binding 2.8424E-4 4 44 2 6292
purine nucleotide binding 3.9774E-4 4 52 2 6292
nucleotide binding 5.1246E-4 4 59 2 6292
nucleoside-triphosphatase activity 5.4488E-4 4 329 3 6292
fructose-bisphosphate aldolase activity 6.3573E-4 4 1 1 6292
hydrolase activity, acting on acid anhydrides 6.7144E-4 4 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.7144E-4 4 353 3 6292
pyrophosphatase activity 6.7144E-4 4 353 3 6292
aldehyde-lyase activity 3.1756E-3 4 5 1 6292
ATPase activity, coupled 3.2394E-3 4 149 2 6292
ATPase activity 6.4227E-3 4 211 2 6292
translation elongation factor activity 6.9763E-3 4 11 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle