YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonucleoprotein complex 2.06E-4 5 514 4 6292
spliceosomal complex 4.9341E-4 5 45 2 6292
nuclear outer membrane 1.7979E-3 5 86 2 6292
nuclear membrane 2.2823E-3 5 97 2 6292
nuclear cap binding complex 2.3825E-3 5 3 1 6292
RNA cap binding complex 4.7604E-3 5 6 1 6292
outer membrane 7.5233E-3 5 178 2 6292
organelle outer membrane 7.5233E-3 5 178 2 6292
nuclear envelope 9.3452E-3 5 199 2 6292
commitment complex 9.5026E-3 5 12 1 6292
U2-type spliceosomal complex 9.5026E-3 5 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

anatomical structure homeostasis 8.6813E-4 5 286 3 6292
telomere organization 8.6813E-4 5 286 3 6292
telomere maintenance 8.6813E-4 5 286 3 6292
mRNA catabolic process 1.1603E-3 5 69 2 6292
RNA catabolic process 1.5574E-3 5 80 2 6292
homeostatic process 2.453E-3 5 408 3 6292
traversing start control point of mitotic cell cycle 4.7604E-3 5 6 1 6292
poly(A)+ mRNA export from nucleus 5.552E-3 5 7 1 6292
response to exogenous dsRNA 5.552E-3 5 7 1 6292
response to dsRNA 5.552E-3 5 7 1 6292
regulation of biological quality 5.8393E-3 5 551 3 6292
chromosome organization 5.9616E-3 5 555 3 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
DNA metabolic process 6.9303E-3 5 585 3 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 8.7135E-3 5 11 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

5'-3' exoribonuclease activity 1.5888E-3 5 2 1 6292
RNA binding 1.8021E-3 5 367 3 6292
recombinase activity 3.1756E-3 5 4 1 6292
5'-3' exonuclease activity 4.7604E-3 5 6 1 6292
telomeric DNA binding 9.5026E-3 5 12 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle